Analysis of interatomic Contacts of Structural Units in PDB entry:
8FNX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FNX entry

There is 1 chain in PDB entry 8FNX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 38GLN 799
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8FNX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 52Right-handed alpha
Helix 2
AA2
A
53 56Right-handed 310
Helix 3
AA3
A
60 81Right-handed alpha
Helix 4
AA4
A
101 119Right-handed alpha
Helix 5
AA5
A
128 146Right-handed alpha
Helix 6
AA6
A
156 162Right-handed alpha
Helix 7
AA7
A
162 175Right-handed alpha
Helix 8
AA8
A
180 195Right-handed alpha
Helix 9
AA9
A
203 207Right-handed 310
Helix 10
AB1
A
219 238Right-handed alpha
Helix 11
AB2
A
239 250Right-handed alpha
Helix 12
AB3
A
251 255Right-handed 310
Helix 13
AB4
A
280 297Right-handed alpha
Helix 14
AB5
A
304 319Right-handed alpha
Helix 15
AB6
A
330 339Right-handed 310
Helix 16
AB7
A
343 360Right-handed alpha
Helix 17
AB8
A
363 381Right-handed alpha
Helix 18
AB9
A
391 403Right-handed alpha
Helix 19
AC1
A
465 469Right-handed 310
Helix 20
AC2
A
475 480Right-handed alpha
Helix 21
AC3
A
501 505Right-handed 310
Helix 22
AC4
A
623 628Right-handed alpha
Helix 23
AC5
A
665 674Right-handed alpha
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There are 8 sheets in PDB entry 8FNX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
216 217anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
269 271anti-parallel
Strand 3
A
275 276anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
327 328anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 416first strand
Strand 2
A
421 425anti-parallel
Strand 3
A
430 434anti-parallel
Strand 4
A
460 464anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 491first strand
Strand 2
A
562 571anti-parallel
Strand 3
A
640 650anti-parallel
Strand 4
A
612 622anti-parallel
Strand 5
A
589 592anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 518first strand
Strand 2
A
521 529anti-parallel
Strand 3
A
536 543anti-parallel
Strand 4
A
548 556anti-parallel
Strand 5
A
656 662anti-parallel
Strand 6
A
603 607anti-parallel
Strand 7
A
596 599anti-parallel
Strand 8
A
578 580anti-parallel
Strand 9
A
583 585anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
682 686first strand
Strand 2
A
690 696anti-parallel
Strand 3
A
706 712anti-parallel
Strand 4
A
727 734anti-parallel
Strand 5
A
737 743anti-parallel
Strand 6
A
792 798anti-parallel
Strand 7
A
760 765anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
716 718first strand
Strand 2
A
721 723anti-parallel
Strand 3
A
751 757anti-parallel
Strand 4
A
777 783anti-parallel
Strand 5
A
769 773anti-parallel
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