Analysis of interatomic Contacts of Structural Units in PDB entry:
8FO1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FO1 entry

There are 4 chains in PDB entry 8FO1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 59	ARG 604
B	LEU 59	ARG 604
C	LEU 59	ARG 604
D	LEU 59	ARG 604

There are 80 helices in PDB entry 8FO1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	111	113	Right-handed 310
Helix 2	AA2	A	114	126	Right-handed alpha
Helix 3	AA3	A	142	149	Right-handed alpha
Helix 4	AA4	A	149	155	Right-handed alpha
Helix 5	AA5	A	164	178	Right-handed alpha
Helix 6	AA6	A	182	186	Right-handed 310
Helix 7	AA7	A	201	209	Right-handed alpha
Helix 8	AA8	A	312	317	Right-handed alpha
Helix 9	AA9	A	321	330	Right-handed alpha
Helix 10	AB1	A	339	353	Right-handed alpha
Helix 11	AB2	A	380	388	Right-handed alpha
Helix 12	AB3	A	392	404	Right-handed alpha
Helix 13	AB4	A	421	436	Right-handed alpha
Helix 14	AB5	A	437	440	Right-handed 310
Helix 15	AB6	A	461	478	Right-handed alpha
Helix 16	AB7	A	493	504	Right-handed alpha
Helix 17	AB8	A	517	526	Right-handed alpha
Helix 18	AB9	A	556	569	Right-handed alpha
Helix 19	AC1	A	571	589	Right-handed alpha
Helix 20	AC2	A	590	604	Right-handed alpha
Helix 21	AC3	B	111	113	Right-handed 310
Helix 22	AC4	B	114	126	Right-handed alpha
Helix 23	AC5	B	142	149	Right-handed alpha
Helix 24	AC6	B	149	155	Right-handed alpha
Helix 25	AC7	B	164	178	Right-handed alpha
Helix 26	AC8	B	182	186	Right-handed 310
Helix 27	AC9	B	201	209	Right-handed alpha
Helix 28	AD1	B	312	317	Right-handed alpha
Helix 29	AD2	B	321	330	Right-handed alpha
Helix 30	AD3	B	339	353	Right-handed alpha
Helix 31	AD4	B	380	388	Right-handed alpha
Helix 32	AD5	B	392	404	Right-handed alpha
Helix 33	AD6	B	421	436	Right-handed alpha
Helix 34	AD7	B	437	440	Right-handed 310
Helix 35	AD8	B	461	478	Right-handed alpha
Helix 36	AD9	B	493	504	Right-handed alpha
Helix 37	AE1	B	517	526	Right-handed alpha
Helix 38	AE2	B	556	569	Right-handed alpha
Helix 39	AE3	B	571	589	Right-handed alpha
Helix 40	AE4	B	590	604	Right-handed alpha
Helix 41	AE5	C	111	113	Right-handed 310
Helix 42	AE6	C	114	126	Right-handed alpha
Helix 43	AE7	C	142	149	Right-handed alpha
Helix 44	AE8	C	149	155	Right-handed alpha
Helix 45	AE9	C	164	178	Right-handed alpha
Helix 46	AF1	C	182	186	Right-handed 310
Helix 47	AF2	C	201	209	Right-handed alpha
Helix 48	AF3	C	312	317	Right-handed alpha
Helix 49	AF4	C	321	330	Right-handed alpha
Helix 50	AF5	C	339	353	Right-handed alpha
Helix 51	AF6	C	380	388	Right-handed alpha
Helix 52	AF7	C	392	404	Right-handed alpha
Helix 53	AF8	C	421	436	Right-handed alpha
Helix 54	AF9	C	437	440	Right-handed 310
Helix 55	AG1	C	461	478	Right-handed alpha
Helix 56	AG2	C	493	504	Right-handed alpha
Helix 57	AG3	C	517	526	Right-handed alpha
Helix 58	AG4	C	556	569	Right-handed alpha
Helix 59	AG5	C	571	589	Right-handed alpha
Helix 60	AG6	C	590	604	Right-handed alpha
Helix 61	AG7	D	111	113	Right-handed 310
Helix 62	AG8	D	114	126	Right-handed alpha
Helix 63	AG9	D	142	149	Right-handed alpha
Helix 64	AH1	D	149	155	Right-handed alpha
Helix 65	AH2	D	164	178	Right-handed alpha
Helix 66	AH3	D	182	186	Right-handed 310
Helix 67	AH4	D	201	209	Right-handed alpha
Helix 68	AH5	D	312	317	Right-handed alpha
Helix 69	AH6	D	321	330	Right-handed alpha
Helix 70	AH7	D	339	353	Right-handed alpha
Helix 71	AH8	D	380	388	Right-handed alpha
Helix 72	AH9	D	392	404	Right-handed alpha
Helix 73	AI1	D	421	436	Right-handed alpha
Helix 74	AI2	D	437	440	Right-handed 310
Helix 75	AI3	D	461	478	Right-handed alpha
Helix 76	AI4	D	493	504	Right-handed alpha
Helix 77	AI5	D	517	526	Right-handed alpha
Helix 78	AI6	D	556	569	Right-handed alpha
Helix 79	AI7	D	571	589	Right-handed alpha
Helix 80	AI8	D	590	604	Right-handed alpha

There are 12 sheets in PDB entry 8FO1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	65	first strand
Strand 2	A	102	105	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	306	first strand
Strand 2	A	335	337	parallel
Strand 3	A	372	374	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	443	450	first strand
Strand 2	A	408	415	parallel
Strand 3	A	506	509	parallel
Strand 4	A	533	537	parallel
Strand 5	A	550	552	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	65	first strand
Strand 2	B	102	105	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	306	first strand
Strand 2	B	335	337	parallel
Strand 3	B	372	374	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	443	450	first strand
Strand 2	B	408	415	parallel
Strand 3	B	506	509	parallel
Strand 4	B	533	537	parallel
Strand 5	B	550	552	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	65	first strand
Strand 2	C	102	105	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	304	306	first strand
Strand 2	C	335	337	parallel
Strand 3	C	372	374	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	443	450	first strand
Strand 2	C	408	415	parallel
Strand 3	C	506	509	parallel
Strand 4	C	533	537	parallel
Strand 5	C	550	552	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	65	first strand
Strand 2	D	102	105	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	304	306	first strand
Strand 2	D	335	337	parallel
Strand 3	D	372	374	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	443	450	first strand
Strand 2	D	408	415	parallel
Strand 3	D	506	509	parallel
Strand 4	D	533	537	parallel
Strand 5	D	550	552	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FO1

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FO1