Analysis of interatomic Contacts of Structural Units in PDB entry:
8FQK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FQK entry

There are 7 chains in PDB entry 8FQK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 76	SER 383
B	SER 76	SER 383
C	SER 76	SER 383
D	SER 76	SER 383
E	SER 76	SER 383
F	SER 76	SER 383
G	SER 76	SER 383

There are 90 helices in PDB entry 8FQK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	76	89	Right-handed alpha
Helix 2	AA2	A	195	198	Right-handed 310
Helix 3	AA3	A	199	207	Right-handed alpha
Helix 4	AA4	A	210	226	Right-handed alpha
Helix 5	AA5	A	235	240	Right-handed alpha
Helix 6	AA6	A	244	248	Right-handed 310
Helix 7	AA7	A	253	266	Right-handed alpha
Helix 8	AA8	A	267	269	Right-handed 310
Helix 9	AA9	A	278	287	Right-handed alpha
Helix 10	AB1	A	299	304	Right-handed alpha
Helix 11	AB2	A	328	332	Right-handed alpha
Helix 12	AB3	A	372	374	Right-handed 310
Helix 13	AB4	B	77	89	Right-handed alpha
Helix 14	AB5	B	133	138	Right-handed alpha
Helix 15	AB6	B	195	198	Right-handed 310
Helix 16	AB7	B	199	207	Right-handed alpha
Helix 17	AB8	B	208	226	Right-handed alpha
Helix 18	AB9	B	235	240	Right-handed alpha
Helix 19	AC1	B	244	248	Right-handed 310
Helix 20	AC2	B	253	266	Right-handed alpha
Helix 21	AC3	B	267	269	Right-handed 310
Helix 22	AC4	B	278	287	Right-handed alpha
Helix 23	AC5	B	299	304	Right-handed alpha
Helix 24	AC6	B	328	332	Right-handed alpha
Helix 25	AC7	B	372	374	Right-handed 310
Helix 26	AC8	C	77	89	Right-handed alpha
Helix 27	AC9	C	133	138	Right-handed alpha
Helix 28	AD1	C	193	198	Right-handed 310
Helix 29	AD2	C	199	205	Right-handed alpha
Helix 30	AD3	C	208	226	Right-handed alpha
Helix 31	AD4	C	235	240	Right-handed alpha
Helix 32	AD5	C	244	248	Right-handed 310
Helix 33	AD6	C	253	266	Right-handed alpha
Helix 34	AD7	C	267	269	Right-handed 310
Helix 35	AD8	C	278	287	Right-handed alpha
Helix 36	AD9	C	299	304	Right-handed alpha
Helix 37	AE1	C	328	332	Right-handed alpha
Helix 38	AE2	C	372	374	Right-handed 310
Helix 39	AE3	D	77	89	Right-handed alpha
Helix 40	AE4	D	133	138	Right-handed alpha
Helix 41	AE5	D	195	198	Right-handed 310
Helix 42	AE6	D	199	210	Right-handed alpha
Helix 43	AE7	D	210	226	Right-handed alpha
Helix 44	AE8	D	235	240	Right-handed alpha
Helix 45	AE9	D	244	248	Right-handed 310
Helix 46	AF1	D	253	266	Right-handed alpha
Helix 47	AF2	D	267	269	Right-handed 310
Helix 48	AF3	D	278	287	Right-handed alpha
Helix 49	AF4	D	299	304	Right-handed alpha
Helix 50	AF5	D	328	332	Right-handed alpha
Helix 51	AF6	D	351	356	Right-handed alpha
Helix 52	AF7	D	372	374	Right-handed 310
Helix 53	AF8	E	77	89	Right-handed alpha
Helix 54	AF9	E	133	138	Right-handed alpha
Helix 55	AG1	E	193	198	Right-handed 310
Helix 56	AG2	E	199	205	Right-handed alpha
Helix 57	AG3	E	208	226	Right-handed alpha
Helix 58	AG4	E	235	240	Right-handed alpha
Helix 59	AG5	E	244	248	Right-handed 310
Helix 60	AG6	E	253	266	Right-handed alpha
Helix 61	AG7	E	267	269	Right-handed 310
Helix 62	AG8	E	278	287	Right-handed alpha
Helix 63	AG9	E	298	304	Right-handed alpha
Helix 64	AH1	E	328	332	Right-handed alpha
Helix 65	AH2	E	349	353	Right-handed 310
Helix 66	AH3	E	372	374	Right-handed 310
Helix 67	AH4	F	77	89	Right-handed alpha
Helix 68	AH5	F	133	138	Right-handed alpha
Helix 69	AH6	F	195	198	Right-handed 310
Helix 70	AH7	F	199	207	Right-handed alpha
Helix 71	AH8	F	208	226	Right-handed alpha
Helix 72	AH9	F	235	240	Right-handed alpha
Helix 73	AI1	F	244	248	Right-handed 310
Helix 74	AI2	F	253	266	Right-handed alpha
Helix 75	AI3	F	267	269	Right-handed 310
Helix 76	AI4	F	278	287	Right-handed alpha
Helix 77	AI5	F	299	303	Right-handed 310
Helix 78	AI6	F	328	332	Right-handed alpha
Helix 79	AI7	F	372	374	Right-handed 310
Helix 80	AI8	G	77	89	Right-handed alpha
Helix 81	AI9	G	133	138	Right-handed alpha
Helix 82	AJ1	G	199	205	Right-handed alpha
Helix 83	AJ2	G	208	226	Right-handed alpha
Helix 84	AJ3	G	235	240	Right-handed alpha
Helix 85	AJ4	G	244	248	Right-handed 310
Helix 86	AJ5	G	253	266	Right-handed alpha
Helix 87	AJ6	G	267	269	Right-handed 310
Helix 88	AJ7	G	278	287	Right-handed alpha
Helix 89	AJ8	G	328	332	Right-handed alpha
Helix 90	AJ9	G	372	374	Right-handed 310

There are 35 sheets in PDB entry 8FQK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	96	first strand
Strand 2	A	342	347	anti-parallel
Strand 3	A	357	370	anti-parallel
Strand 4	A	333	337	anti-parallel
Strand 5	A	139	142	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	96	first strand
Strand 2	A	342	347	anti-parallel
Strand 3	A	357	370	anti-parallel
Strand 4	A	184	193	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	155	first strand
Strand 2	A	174	182	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	242	first strand
Strand 2	A	376	380	parallel
Strand 3	A	323	327	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	311	315	parallel
Strand 3	A	307	308	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	290	first strand
Strand 2	A	294	295	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	98	first strand
Strand 2	B	341	347	anti-parallel
Strand 3	B	357	370	anti-parallel
Strand 4	B	333	337	anti-parallel
Strand 5	B	139	142	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	98	first strand
Strand 2	B	341	347	anti-parallel
Strand 3	B	357	370	anti-parallel
Strand 4	B	184	193	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	154	first strand
Strand 2	B	175	182	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	242	first strand
Strand 2	B	376	380	parallel
Strand 3	B	323	327	anti-parallel
Strand 4	B	275	277	anti-parallel
Strand 5	B	311	315	parallel
Strand 6	B	307	308	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	98	first strand
Strand 2	C	341	347	anti-parallel
Strand 3	C	358	370	anti-parallel
Strand 4	C	333	337	anti-parallel
Strand 5	C	139	142	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	98	first strand
Strand 2	C	341	347	anti-parallel
Strand 3	C	358	370	anti-parallel
Strand 4	C	184	192	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	154	first strand
Strand 2	C	175	182	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	242	first strand
Strand 2	C	376	380	parallel
Strand 3	C	323	327	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	277	first strand
Strand 2	C	311	315	parallel
Strand 3	C	307	308	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	98	first strand
Strand 2	D	341	346	anti-parallel
Strand 3	D	357	370	anti-parallel
Strand 4	D	333	337	anti-parallel
Strand 5	D	139	142	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	98	first strand
Strand 2	D	341	346	anti-parallel
Strand 3	D	357	370	anti-parallel
Strand 4	D	184	193	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	155	first strand
Strand 2	D	174	182	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	242	first strand
Strand 2	D	376	380	parallel
Strand 3	D	323	327	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	277	first strand
Strand 2	D	311	315	parallel
Strand 3	D	307	308	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	93	96	first strand
Strand 2	E	342	347	anti-parallel
Strand 3	E	358	370	anti-parallel
Strand 4	E	333	337	anti-parallel
Strand 5	E	139	142	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	93	96	first strand
Strand 2	E	342	347	anti-parallel
Strand 3	E	358	370	anti-parallel
Strand 4	E	184	192	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	147	155	first strand
Strand 2	E	174	182	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	241	242	first strand
Strand 2	E	376	380	parallel
Strand 3	E	323	327	anti-parallel
Strand 4	E	275	277	anti-parallel
Strand 5	E	311	315	parallel
Strand 6	E	307	308	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	93	98	first strand
Strand 2	F	341	347	anti-parallel
Strand 3	F	357	370	anti-parallel
Strand 4	F	333	337	anti-parallel
Strand 5	F	139	142	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	93	98	first strand
Strand 2	F	341	347	anti-parallel
Strand 3	F	357	370	anti-parallel
Strand 4	F	184	193	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	147	155	first strand
Strand 2	F	174	182	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	241	242	first strand
Strand 2	F	376	380	parallel
Strand 3	F	323	327	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	275	277	first strand
Strand 2	F	311	315	parallel
Strand 3	F	307	308	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	93	97	first strand
Strand 2	G	342	346	anti-parallel
Strand 3	G	357	370	anti-parallel
Strand 4	G	333	337	anti-parallel
Strand 5	G	139	142	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	93	97	first strand
Strand 2	G	342	346	anti-parallel
Strand 3	G	357	370	anti-parallel
Strand 4	G	184	193	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	147	155	first strand
Strand 2	G	174	182	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	241	242	first strand
Strand 2	G	376	380	parallel
Strand 3	G	323	327	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	275	277	first strand
Strand 2	G	311	315	parallel
Strand 3	G	307	308	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	289	290	first strand
Strand 2	G	294	295	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FQK

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FQK