Analysis of interatomic Contacts of Structural Units in PDB entry:
8FRW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FRW entry

There are 5 chains in PDB entry 8FRW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 7	SER 462
B	THR 7	SER 462
C	THR 7	SER 462
D	THR 7	SER 462
E	THR 7	SER 462

There are 40 helices in PDB entry 8FRW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	21	Right-handed alpha
Helix 2	AA2	A	91	93	Right-handed 310
Helix 3	AA3	A	170	175	Right-handed alpha
Helix 4	AA4	A	220	243	Right-handed alpha
Helix 5	AA5	A	250	270	Right-handed alpha
Helix 6	AA6	A	281	309	Right-handed alpha
Helix 7	AA7	A	317	328	Right-handed alpha
Helix 8	AA8	A	398	462	Right-handed alpha
Helix 9	AA9	B	10	21	Right-handed alpha
Helix 10	AB1	B	91	93	Right-handed 310
Helix 11	AB2	B	170	175	Right-handed alpha
Helix 12	AB3	B	220	243	Right-handed alpha
Helix 13	AB4	B	250	270	Right-handed alpha
Helix 14	AB5	B	281	309	Right-handed alpha
Helix 15	AB6	B	317	328	Right-handed alpha
Helix 16	AB7	B	398	462	Right-handed alpha
Helix 17	AB8	C	10	21	Right-handed alpha
Helix 18	AB9	C	91	93	Right-handed 310
Helix 19	AC1	C	170	175	Right-handed alpha
Helix 20	AC2	C	220	243	Right-handed alpha
Helix 21	AC3	C	250	270	Right-handed alpha
Helix 22	AC4	C	281	309	Right-handed alpha
Helix 23	AC5	C	317	328	Right-handed alpha
Helix 24	AC6	C	398	462	Right-handed alpha
Helix 25	AC7	D	10	21	Right-handed alpha
Helix 26	AC8	D	91	93	Right-handed 310
Helix 27	AC9	D	170	175	Right-handed alpha
Helix 28	AD1	D	220	243	Right-handed alpha
Helix 29	AD2	D	250	270	Right-handed alpha
Helix 30	AD3	D	281	309	Right-handed alpha
Helix 31	AD4	D	317	328	Right-handed alpha
Helix 32	AD5	D	398	462	Right-handed alpha
Helix 33	AD6	E	10	21	Right-handed alpha
Helix 34	AD7	E	91	93	Right-handed 310
Helix 35	AD8	E	170	175	Right-handed alpha
Helix 36	AD9	E	220	243	Right-handed alpha
Helix 37	AE1	E	250	270	Right-handed alpha
Helix 38	AE2	E	281	309	Right-handed alpha
Helix 39	AE3	E	317	328	Right-handed alpha
Helix 40	AE4	E	398	462	Right-handed alpha

There are 15 sheets in PDB entry 8FRW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	89	first strand
Strand 2	A	114	118	anti-parallel
Strand 3	A	120	134	anti-parallel
Strand 4	A	103	105	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	89	first strand
Strand 2	A	114	118	anti-parallel
Strand 3	A	120	134	anti-parallel
Strand 4	A	57	74	anti-parallel
Strand 5	A	37	52	anti-parallel
Strand 6	A	163	167	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	146	155	anti-parallel
Strand 3	A	207	218	anti-parallel
Strand 4	A	187	199	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	89	first strand
Strand 2	B	114	118	anti-parallel
Strand 3	B	120	134	anti-parallel
Strand 4	B	103	105	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	89	first strand
Strand 2	B	114	118	anti-parallel
Strand 3	B	120	134	anti-parallel
Strand 4	B	57	74	anti-parallel
Strand 5	B	37	52	anti-parallel
Strand 6	B	163	167	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	146	155	anti-parallel
Strand 3	B	207	218	anti-parallel
Strand 4	B	187	199	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	89	first strand
Strand 2	C	114	118	anti-parallel
Strand 3	C	120	134	anti-parallel
Strand 4	C	103	105	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	89	first strand
Strand 2	C	114	118	anti-parallel
Strand 3	C	120	134	anti-parallel
Strand 4	C	57	74	anti-parallel
Strand 5	C	37	52	anti-parallel
Strand 6	C	163	167	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	100	first strand
Strand 2	C	146	155	anti-parallel
Strand 3	C	207	218	anti-parallel
Strand 4	C	187	199	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	89	first strand
Strand 2	D	114	118	anti-parallel
Strand 3	D	120	134	anti-parallel
Strand 4	D	103	105	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	89	first strand
Strand 2	D	114	118	anti-parallel
Strand 3	D	120	134	anti-parallel
Strand 4	D	57	74	anti-parallel
Strand 5	D	37	52	anti-parallel
Strand 6	D	163	167	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	100	first strand
Strand 2	D	146	155	anti-parallel
Strand 3	D	207	218	anti-parallel
Strand 4	D	187	199	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	89	first strand
Strand 2	E	114	118	anti-parallel
Strand 3	E	120	134	anti-parallel
Strand 4	E	103	105	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	89	first strand
Strand 2	E	114	118	anti-parallel
Strand 3	E	120	134	anti-parallel
Strand 4	E	57	74	anti-parallel
Strand 5	E	37	52	anti-parallel
Strand 6	E	163	167	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	100	first strand
Strand 2	E	146	155	anti-parallel
Strand 3	E	207	218	anti-parallel
Strand 4	E	187	199	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FRW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FRW