Analysis of interatomic Contacts of Structural Units in PDB entry:
8FS4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FS4 entry

There are 11 chains in PDB entry 8FS4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 64	GLU 544
B	SER 6	LYS 322
C	SER 9	VAL 336
D	GLN 24	LEU 353
E	SER 2	ASP 354
F	MET 1	LEU 474
G	ASN 9	THR 330
H	SER 2	ASN 380
I	G 11	T 42
J	A 9	A 21
K	G 1	C 10

There are120 helices in PDB entry 8FS4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	70	Right-handed alpha
Helix 2	AA2	A	74	78	Right-handed 310
Helix 3	AA3	A	81	96	Right-handed alpha
Helix 4	AA4	A	116	131	Right-handed alpha
Helix 5	AA5	A	164	172	Right-handed alpha
Helix 6	AA6	A	194	210	Right-handed alpha
Helix 7	AA7	A	238	241	Right-handed 310
Helix 8	AA8	A	245	250	Right-handed alpha
Helix 9	AA9	A	251	257	Right-handed alpha
Helix 10	AB1	A	269	282	Right-handed alpha
Helix 11	AB2	A	284	291	Right-handed alpha
Helix 12	AB3	A	297	308	Right-handed alpha
Helix 13	AB4	A	310	324	Right-handed alpha
Helix 14	AB5	A	338	348	Right-handed alpha
Helix 15	AB6	A	355	367	Right-handed alpha
Helix 16	AB7	A	373	384	Right-handed alpha
Helix 17	AB8	A	385	387	Right-handed 310
Helix 18	AB9	A	393	409	Right-handed alpha
Helix 19	AC1	A	413	432	Right-handed alpha
Helix 20	AC2	A	445	471	Right-handed alpha
Helix 21	AC3	A	476	483	Right-handed alpha
Helix 22	AC4	A	483	498	Right-handed alpha
Helix 23	AC5	B	10	15	Right-handed alpha
Helix 24	AC6	B	19	23	Right-handed 310
Helix 25	AC7	B	26	40	Right-handed alpha
Helix 26	AC8	B	55	68	Right-handed alpha
Helix 27	AC9	B	69	71	Right-handed 310
Helix 28	AD1	B	85	90	Right-handed alpha
Helix 29	AD2	B	93	99	Right-handed alpha
Helix 30	AD3	B	116	119	Right-handed 310
Helix 31	AD4	B	120	134	Right-handed alpha
Helix 32	AD5	B	146	150	Right-handed 310
Helix 33	AD6	B	151	157	Right-handed alpha
Helix 34	AD7	B	167	183	Right-handed alpha
Helix 35	AD8	B	187	199	Right-handed alpha
Helix 36	AD9	B	201	216	Right-handed alpha
Helix 37	AE1	B	220	228	Right-handed alpha
Helix 38	AE2	B	231	241	Right-handed alpha
Helix 39	AE3	B	244	255	Right-handed alpha
Helix 40	AE4	B	262	276	Right-handed alpha
Helix 41	AE5	B	281	301	Right-handed alpha
Helix 42	AE6	B	305	322	Right-handed alpha
Helix 43	AE7	C	14	19	Right-handed alpha
Helix 44	AE8	C	23	27	Right-handed 310
Helix 45	AE9	C	31	44	Right-handed alpha
Helix 46	AF1	C	58	71	Right-handed alpha
Helix 47	AF2	C	89	103	Right-handed alpha
Helix 48	AF3	C	118	122	Right-handed 310
Helix 49	AF4	C	123	130	Right-handed alpha
Helix 50	AF5	C	130	135	Right-handed alpha
Helix 51	AF6	C	149	153	Right-handed 310
Helix 52	AF7	C	154	160	Right-handed alpha
Helix 53	AF8	C	170	186	Right-handed alpha
Helix 54	AF9	C	190	202	Right-handed alpha
Helix 55	AG1	C	204	219	Right-handed alpha
Helix 56	AG2	C	228	237	Right-handed alpha
Helix 57	AG3	C	240	254	Right-handed alpha
Helix 58	AG4	C	255	271	Right-handed alpha
Helix 59	AG5	C	273	288	Right-handed alpha
Helix 60	AG6	C	293	312	Right-handed alpha
Helix 61	AG7	C	315	334	Right-handed alpha
Helix 62	AG8	D	26	30	Right-handed 310
Helix 63	AG9	D	35	39	Right-handed 310
Helix 64	AH1	D	42	55	Right-handed alpha
Helix 65	AH2	D	70	83	Right-handed alpha
Helix 66	AH3	D	84	91	Right-handed alpha
Helix 67	AH4	D	102	116	Right-handed alpha
Helix 68	AH5	D	122	129	Right-handed alpha
Helix 69	AH6	D	141	145	Right-handed 310
Helix 70	AH7	D	146	152	Right-handed alpha
Helix 71	AH8	D	153	160	Right-handed alpha
Helix 72	AH9	D	172	176	Right-handed 310
Helix 73	AI1	D	177	184	Right-handed alpha
Helix 74	AI2	D	197	208	Right-handed alpha
Helix 75	AI3	D	218	224	Right-handed alpha
Helix 76	AI4	D	227	246	Right-handed alpha
Helix 77	AI5	D	252	261	Right-handed alpha
Helix 78	AI6	D	264	278	Right-handed alpha
Helix 79	AI7	D	279	291	Right-handed alpha
Helix 80	AI8	D	292	294	Right-handed 310
Helix 81	AI9	D	296	311	Right-handed alpha
Helix 82	AJ1	D	315	335	Right-handed alpha
Helix 83	AJ2	D	338	352	Right-handed alpha
Helix 84	AJ3	E	3	8	Right-handed alpha
Helix 85	AJ4	E	12	16	Right-handed 310
Helix 86	AJ5	E	19	32	Right-handed alpha
Helix 87	AJ6	E	33	36	Right-handed 310
Helix 88	AJ7	E	48	62	Right-handed alpha
Helix 89	AJ8	E	98	103	Right-handed 310
Helix 90	AJ9	E	104	119	Right-handed alpha
Helix 91	AK1	E	143	146	Right-handed 310
Helix 92	AK2	E	153	161	Right-handed alpha
Helix 93	AK3	E	178	184	Right-handed alpha
Helix 94	AK4	E	194	209	Right-handed alpha
Helix 95	AK5	E	217	227	Right-handed alpha
Helix 96	AK6	E	229	244	Right-handed alpha
Helix 97	AK7	E	257	273	Right-handed alpha
Helix 98	AK8	E	275	291	Right-handed alpha
Helix 99	AK9	E	295	308	Right-handed alpha
Helix 100	AL1	E	314	334	Right-handed alpha
Helix 101	AL2	E	337	354	Right-handed alpha
Helix 102	AL3	F	16	30	Right-handed alpha
Helix 103	AL4	F	96	113	Right-handed alpha
Helix 104	AL5	F	213	219	Right-handed alpha
Helix 105	AL6	F	240	252	Right-handed alpha
Helix 106	AL7	F	253	255	Right-handed 310
Helix 107	AL8	F	412	424	Right-handed alpha
Helix 108	AL9	G	17	27	Right-handed alpha
Helix 109	AM1	G	65	67	Right-handed 310
Helix 110	AM2	G	86	97	Right-handed alpha
Helix 111	AM3	G	98	100	Right-handed 310
Helix 112	AM4	G	160	173	Right-handed alpha
Helix 113	AM5	G	239	243	Right-handed alpha
Helix 114	AM6	G	245	250	Right-handed alpha
Helix 115	AM7	G	321	329	Right-handed alpha
Helix 116	AM8	H	9	27	Right-handed alpha
Helix 117	AM9	H	59	61	Right-handed 310
Helix 118	AN1	H	98	105	Right-handed alpha
Helix 119	AN2	H	233	243	Right-handed alpha
Helix 120	AN3	H	328	336	Right-handed alpha

There are 16 sheets in PDB entry 8FS4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	185	first strand
Strand 2	A	219	224	parallel
Strand 3	A	104	109	parallel
Strand 4	A	260	264	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	227	first strand
Strand 2	A	243	244	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	114	first strand
Strand 2	B	138	143	parallel
Strand 3	B	45	48	parallel
Strand 4	B	159	162	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	186	first strand
Strand 2	B	218	219	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	82	first strand
Strand 2	C	112	116	parallel
Strand 3	C	141	147	parallel
Strand 4	C	49	52	parallel
Strand 5	C	162	165	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	188	189	first strand
Strand 2	C	226	227	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	95	first strand
Strand 2	D	135	139	parallel
Strand 3	D	164	170	parallel
Strand 4	D	61	64	parallel
Strand 5	D	185	188	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	69	76	first strand
Strand 2	E	82	89	anti-parallel
Strand 3	E	93	96	anti-parallel
Strand 4	E	136	141	parallel
Strand 5	E	165	171	parallel
Strand 6	E	39	42	parallel
Strand 7	E	186	189	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	5	first strand
Strand 2	F	80	82	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	92	first strand
Strand 2	F	34	37	anti-parallel
Strand 3	F	42	46	anti-parallel
Strand 4	F	67	72	anti-parallel
Strand 5	F	464	469	anti-parallel
Strand 6	F	437	443	anti-parallel
Strand 7	F	427	432	anti-parallel
Strand 8	F	231	235	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	153	160	first strand
Strand 2	F	203	210	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	406	411	first strand
Strand 2	F	261	267	anti-parallel
Strand 3	F	280	285	anti-parallel
Strand 4	F	291	296	anti-parallel
Strand 5	G	126	132	anti-parallel
Strand 6	G	117	122	anti-parallel
Strand 7	G	105	110	anti-parallel
Strand 8	G	11	15	anti-parallel
Strand 9	G	69	70	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	79	85	first strand
Strand 2	G	36	42	anti-parallel
Strand 3	G	45	52	anti-parallel
Strand 4	G	56	63	anti-parallel
Strand 5	G	305	311	anti-parallel
Strand 6	G	264	270	anti-parallel
Strand 7	G	254	260	anti-parallel
Strand 8	G	152	159	anti-parallel
Strand 9	G	214	219	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	232	238	first strand
Strand 2	G	177	185	anti-parallel
Strand 3	G	189	198	anti-parallel
Strand 4	G	201	207	anti-parallel
Strand 5	H	145	148	anti-parallel
Strand 6	H	135	140	anti-parallel
Strand 7	H	113	120	anti-parallel
Strand 8	H	3	7	anti-parallel
Strand 9	H	64	66	anti-parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	153	155	first strand
Strand 2	H	92	97	anti-parallel
Strand 3	H	29	34	anti-parallel
Strand 4	H	38	42	anti-parallel
Strand 5	H	50	57	anti-parallel
Strand 6	H	369	375	anti-parallel
Strand 7	H	360	365	anti-parallel
Strand 8	H	349	353	anti-parallel
Strand 9	H	228	230	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	284	289	first strand
Strand 2	H	260	266	anti-parallel
Strand 3	H	251	256	anti-parallel
Strand 4	H	322	324	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FS4

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FS4