Analysis of interatomic Contacts of Structural Units in PDB entry:
8FSB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FSB entry

There are 5 chains in PDB entry 8FSB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 7	LEU 465
B	THR 7	LEU 465
C	THR 7	LEU 465
D	THR 7	LEU 465
E	THR 7	LEU 465

There are 80 helices in PDB entry 8FSB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	21	Right-handed alpha
Helix 2	AA2	A	76	81	Right-handed 310
Helix 3	AA3	A	89	93	Right-handed 310
Helix 4	AA4	A	141	144	Right-handed 310
Helix 5	AA5	A	170	176	Right-handed alpha
Helix 6	AA6	A	220	233	Right-handed alpha
Helix 7	AA7	A	233	243	Right-handed alpha
Helix 8	AA8	A	250	270	Right-handed alpha
Helix 9	AA9	A	281	308	Right-handed alpha
Helix 10	AB1	A	319	327	Right-handed alpha
Helix 11	AB2	A	327	332	Right-handed alpha
Helix 12	AB3	A	398	410	Right-handed alpha
Helix 13	AB4	A	411	418	Right-handed alpha
Helix 14	AB5	A	419	424	Right-handed alpha
Helix 15	AB6	A	426	461	Right-handed alpha
Helix 16	AB7	A	462	465	Right-handed 310
Helix 17	AB8	B	10	21	Right-handed alpha
Helix 18	AB9	B	76	81	Right-handed 310
Helix 19	AC1	B	89	93	Right-handed 310
Helix 20	AC2	B	141	144	Right-handed 310
Helix 21	AC3	B	170	176	Right-handed alpha
Helix 22	AC4	B	220	233	Right-handed alpha
Helix 23	AC5	B	233	243	Right-handed alpha
Helix 24	AC6	B	250	270	Right-handed alpha
Helix 25	AC7	B	281	308	Right-handed alpha
Helix 26	AC8	B	319	327	Right-handed alpha
Helix 27	AC9	B	327	332	Right-handed alpha
Helix 28	AD1	B	398	410	Right-handed alpha
Helix 29	AD2	B	411	418	Right-handed alpha
Helix 30	AD3	B	419	424	Right-handed alpha
Helix 31	AD4	B	426	461	Right-handed alpha
Helix 32	AD5	B	462	465	Right-handed 310
Helix 33	AD6	C	10	21	Right-handed alpha
Helix 34	AD7	C	76	81	Right-handed 310
Helix 35	AD8	C	89	93	Right-handed 310
Helix 36	AD9	C	141	144	Right-handed 310
Helix 37	AE1	C	170	176	Right-handed alpha
Helix 38	AE2	C	220	233	Right-handed alpha
Helix 39	AE3	C	233	243	Right-handed alpha
Helix 40	AE4	C	250	270	Right-handed alpha
Helix 41	AE5	C	281	308	Right-handed alpha
Helix 42	AE6	C	319	327	Right-handed alpha
Helix 43	AE7	C	327	332	Right-handed alpha
Helix 44	AE8	C	398	410	Right-handed alpha
Helix 45	AE9	C	411	418	Right-handed alpha
Helix 46	AF1	C	419	424	Right-handed alpha
Helix 47	AF2	C	426	461	Right-handed alpha
Helix 48	AF3	C	462	465	Right-handed 310
Helix 49	AF4	D	10	21	Right-handed alpha
Helix 50	AF5	D	76	81	Right-handed 310
Helix 51	AF6	D	89	93	Right-handed 310
Helix 52	AF7	D	141	144	Right-handed 310
Helix 53	AF8	D	170	176	Right-handed alpha
Helix 54	AF9	D	220	233	Right-handed alpha
Helix 55	AG1	D	233	243	Right-handed alpha
Helix 56	AG2	D	250	270	Right-handed alpha
Helix 57	AG3	D	281	308	Right-handed alpha
Helix 58	AG4	D	319	327	Right-handed alpha
Helix 59	AG5	D	327	332	Right-handed alpha
Helix 60	AG6	D	398	410	Right-handed alpha
Helix 61	AG7	D	411	418	Right-handed alpha
Helix 62	AG8	D	419	424	Right-handed alpha
Helix 63	AG9	D	426	461	Right-handed alpha
Helix 64	AH1	D	462	465	Right-handed 310
Helix 65	AH2	E	10	21	Right-handed alpha
Helix 66	AH3	E	76	81	Right-handed 310
Helix 67	AH4	E	89	93	Right-handed 310
Helix 68	AH5	E	141	144	Right-handed 310
Helix 69	AH6	E	170	176	Right-handed alpha
Helix 70	AH7	E	220	233	Right-handed alpha
Helix 71	AH8	E	233	243	Right-handed alpha
Helix 72	AH9	E	250	270	Right-handed alpha
Helix 73	AI1	E	281	308	Right-handed alpha
Helix 74	AI2	E	319	327	Right-handed alpha
Helix 75	AI3	E	327	332	Right-handed alpha
Helix 76	AI4	E	398	410	Right-handed alpha
Helix 77	AI5	E	411	418	Right-handed alpha
Helix 78	AI6	E	419	424	Right-handed alpha
Helix 79	AI7	E	426	461	Right-handed alpha
Helix 80	AI8	E	462	465	Right-handed 310

There are 10 sheets in PDB entry 8FSB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	115	117	anti-parallel
Strand 3	A	122	134	anti-parallel
Strand 4	A	57	69	anti-parallel
Strand 5	A	37	51	anti-parallel
Strand 6	A	163	167	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	146	155	anti-parallel
Strand 3	A	207	218	anti-parallel
Strand 4	A	187	199	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	115	117	anti-parallel
Strand 3	B	122	134	anti-parallel
Strand 4	B	57	69	anti-parallel
Strand 5	B	37	51	anti-parallel
Strand 6	B	163	167	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	146	155	anti-parallel
Strand 3	B	207	218	anti-parallel
Strand 4	B	187	199	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	C	115	117	anti-parallel
Strand 3	C	122	134	anti-parallel
Strand 4	C	57	69	anti-parallel
Strand 5	C	37	51	anti-parallel
Strand 6	C	163	167	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	100	first strand
Strand 2	C	146	155	anti-parallel
Strand 3	C	207	218	anti-parallel
Strand 4	C	187	199	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	88	first strand
Strand 2	D	115	117	anti-parallel
Strand 3	D	122	134	anti-parallel
Strand 4	D	57	69	anti-parallel
Strand 5	D	37	51	anti-parallel
Strand 6	D	163	167	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	100	first strand
Strand 2	D	146	155	anti-parallel
Strand 3	D	207	218	anti-parallel
Strand 4	D	187	199	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	E	115	117	anti-parallel
Strand 3	E	122	134	anti-parallel
Strand 4	E	57	69	anti-parallel
Strand 5	E	37	51	anti-parallel
Strand 6	E	163	167	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	100	first strand
Strand 2	E	146	155	anti-parallel
Strand 3	E	207	218	anti-parallel
Strand 4	E	187	199	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FSB

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FSB