Analysis of interatomic Contacts of Structural Units in PDB entry:
8FSZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FSZ entry

There are 5 chains in PDB entry 8FSZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 7	LEU 465
B	THR 7	LEU 465
C	THR 7	LEU 465
D	THR 7	LEU 465
E	THR 7	LEU 465

There are 50 helices in PDB entry 8FSZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	20	Right-handed alpha
Helix 2	AA2	A	170	176	Right-handed alpha
Helix 3	AA3	A	220	234	Right-handed alpha
Helix 4	AA4	A	236	241	Right-handed alpha
Helix 5	AA5	A	247	262	Right-handed alpha
Helix 6	AA6	A	262	273	Right-handed alpha
Helix 7	AA7	A	281	310	Right-handed alpha
Helix 8	AA8	A	318	332	Right-handed alpha
Helix 9	AA9	A	398	425	Right-handed alpha
Helix 10	AB1	A	427	462	Right-handed alpha
Helix 11	AB2	B	10	20	Right-handed alpha
Helix 12	AB3	B	170	176	Right-handed alpha
Helix 13	AB4	B	220	234	Right-handed alpha
Helix 14	AB5	B	236	241	Right-handed alpha
Helix 15	AB6	B	247	262	Right-handed alpha
Helix 16	AB7	B	262	273	Right-handed alpha
Helix 17	AB8	B	281	310	Right-handed alpha
Helix 18	AB9	B	318	332	Right-handed alpha
Helix 19	AC1	B	398	425	Right-handed alpha
Helix 20	AC2	B	427	462	Right-handed alpha
Helix 21	AC3	C	10	20	Right-handed alpha
Helix 22	AC4	C	170	176	Right-handed alpha
Helix 23	AC5	C	220	234	Right-handed alpha
Helix 24	AC6	C	236	241	Right-handed alpha
Helix 25	AC7	C	247	262	Right-handed alpha
Helix 26	AC8	C	262	273	Right-handed alpha
Helix 27	AC9	C	281	310	Right-handed alpha
Helix 28	AD1	C	318	332	Right-handed alpha
Helix 29	AD2	C	398	425	Right-handed alpha
Helix 30	AD3	C	427	462	Right-handed alpha
Helix 31	AD4	D	10	20	Right-handed alpha
Helix 32	AD5	D	170	176	Right-handed alpha
Helix 33	AD6	D	220	234	Right-handed alpha
Helix 34	AD7	D	236	241	Right-handed alpha
Helix 35	AD8	D	247	262	Right-handed alpha
Helix 36	AD9	D	262	273	Right-handed alpha
Helix 37	AE1	D	281	310	Right-handed alpha
Helix 38	AE2	D	318	332	Right-handed alpha
Helix 39	AE3	D	398	425	Right-handed alpha
Helix 40	AE4	D	427	462	Right-handed alpha
Helix 41	AE5	E	10	20	Right-handed alpha
Helix 42	AE6	E	170	176	Right-handed alpha
Helix 43	AE7	E	220	234	Right-handed alpha
Helix 44	AE8	E	236	241	Right-handed alpha
Helix 45	AE9	E	247	262	Right-handed alpha
Helix 46	AF1	E	262	273	Right-handed alpha
Helix 47	AF2	E	281	310	Right-handed alpha
Helix 48	AF3	E	318	332	Right-handed alpha
Helix 49	AF4	E	398	425	Right-handed alpha
Helix 50	AF5	E	427	462	Right-handed alpha

There are 15 sheets in PDB entry 8FSZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	133	first strand
Strand 2	A	57	68	anti-parallel
Strand 3	A	37	52	anti-parallel
Strand 4	A	163	167	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	89	first strand
Strand 2	A	114	118	anti-parallel
Strand 3	A	123	124	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	146	155	anti-parallel
Strand 3	A	207	218	anti-parallel
Strand 4	A	187	199	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	133	first strand
Strand 2	B	57	68	anti-parallel
Strand 3	B	37	52	anti-parallel
Strand 4	B	163	167	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	89	first strand
Strand 2	B	114	118	anti-parallel
Strand 3	B	123	124	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	146	155	anti-parallel
Strand 3	B	207	218	anti-parallel
Strand 4	B	187	199	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	133	first strand
Strand 2	C	57	68	anti-parallel
Strand 3	C	37	52	anti-parallel
Strand 4	C	163	167	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	89	first strand
Strand 2	C	114	118	anti-parallel
Strand 3	C	123	124	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	100	first strand
Strand 2	C	146	155	anti-parallel
Strand 3	C	207	218	anti-parallel
Strand 4	C	187	199	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	133	first strand
Strand 2	D	57	68	anti-parallel
Strand 3	D	37	52	anti-parallel
Strand 4	D	163	167	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	89	first strand
Strand 2	D	114	118	anti-parallel
Strand 3	D	123	124	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	100	first strand
Strand 2	D	146	155	anti-parallel
Strand 3	D	207	218	anti-parallel
Strand 4	D	187	199	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	133	first strand
Strand 2	E	57	68	anti-parallel
Strand 3	E	37	52	anti-parallel
Strand 4	E	163	167	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	89	first strand
Strand 2	E	114	118	anti-parallel
Strand 3	E	123	124	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	100	first strand
Strand 2	E	146	155	anti-parallel
Strand 3	E	207	218	anti-parallel
Strand 4	E	187	199	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FSZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FSZ