Analysis of interatomic Contacts of Structural Units in PDB entry:
8FT8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FT8 entry

There is 1 chain in PDB entry 8FT8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12SER 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8FT8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 20Right-handed 310
Helix 2
AA2
A
22 26Right-handed 310
Helix 3
AA3
A
27 43Right-handed alpha
Helix 4
AA4
A
55 60Right-handed alpha
Helix 5
AA5
A
63 71Right-handed alpha
Helix 6
AA6
A
74 88Right-handed alpha
Helix 7
AA7
A
102 106Right-handed 310
Helix 8
AA8
A
108 123Right-handed alpha
Helix 9
AA9
A
148 161Right-handed alpha
Helix 10
AB1
A
169 185Right-handed alpha
Helix 11
AB2
A
186 189Right-handed 310
Helix 12
AB3
A
204 219Right-handed alpha
Helix 13
AB4
A
232 240Right-handed alpha
Helix 14
AB5
A
242 244Right-handed 310
Helix 15
AB6
A
250 252Right-handed 310
Helix 16
AB7
A
254 254Right-handed 310
Helix 17
AB8
A
255 265Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8FT8.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 146first strand
Strand 2
A
128 135anti-parallel
Strand 3
A
93 100parallel
Strand 4
A
191 197parallel
Strand 5
A
222 227parallel
Strand 6
A
246 248parallel
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