Analysis of interatomic Contacts of Structural Units in PDB entry:
8FTI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FTI entry

There are 2 chains in PDB entry 8FTI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 14LYS 775
B
 G -67 C 35
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8FTI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 24Right-handed 310
Helix 2
AA2
A
25 41Right-handed alpha
Helix 3
AA3
A
43 50Right-handed alpha
Helix 4
AA4
A
62 72Right-handed alpha
Helix 5
AA5
A
75 89Right-handed alpha
Helix 6
AA6
A
103 123Right-handed alpha
Helix 7
AA7
A
141 151Right-handed alpha
Helix 8
AA8
A
154 162Right-handed alpha
Helix 9
AA9
A
166 170Right-handed 310
Helix 10
AB1
A
174 184Right-handed alpha
Helix 11
AB2
A
197 211Right-handed alpha
Helix 12
AB3
A
214 221Right-handed alpha
Helix 13
AB4
A
245 258Right-handed alpha
Helix 14
AB5
A
325 338Right-handed alpha
Helix 15
AB6
A
339 360Right-handed alpha
Helix 16
AB7
A
365 370Right-handed alpha
Helix 17
AB8
A
373 380Right-handed alpha
Helix 18
AB9
A
386 408Right-handed alpha
Helix 19
AC1
A
413 429Right-handed alpha
Helix 20
AC2
A
434 447Right-handed alpha
Helix 21
AC3
A
449 463Right-handed alpha
Helix 22
AC4
A
467 476Right-handed alpha
Helix 23
AC5
A
479 497Right-handed alpha
Helix 24
AC6
A
500 508Right-handed alpha
Helix 25
AC7
A
516 527Right-handed alpha
Helix 26
AC8
A
533 540Right-handed alpha
Helix 27
AC9
A
546 558Right-handed alpha
Helix 28
AD1
A
582 606Right-handed alpha
Helix 29
AD2
A
639 644Right-handed alpha
Helix 30
AD3
A
652 662Right-handed alpha
Helix 31
AD4
A
672 706Right-handed alpha
Helix 32
AD5
A
719 725Right-handed alpha
Helix 33
AD6
A
728 744Right-handed alpha
Helix 34
AD7
A
750 764Right-handed alpha
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There are 3 sheets in PDB entry 8FTI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 291first strand
Strand 2
A
265 267anti-parallel
Strand 3
A
300 301anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 314first strand
Strand 2
A
317 324anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 618first strand
Strand 2
A
621 624anti-parallel
Strand 3
A
636 638anti-parallel
Strand 4
A
670 671parallel
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