Analysis of interatomic Contacts of Structural Units in PDB entry:
8FTM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FTM entry

There are 2 chains in PDB entry 8FTM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1102LYS 1857
B
 MET 1099PHE 1684
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 8FTM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1107 1116Right-handed alpha
Helix 2
AA2
A
1141 1168Right-handed alpha
Helix 3
AA3
A
1195 1202Right-handed alpha
Helix 4
AA4
A
1216 1220Right-handed 310
Helix 5
AA5
A
1253 1257Right-handed 310
Helix 6
AA6
A
1271 1284Right-handed alpha
Helix 7
AA7
A
1285 1287Right-handed 310
Helix 8
AA8
A
1289 1296Right-handed alpha
Helix 9
AA9
A
1305 1317Right-handed alpha
Helix 10
AB1
A
1319 1332Right-handed alpha
Helix 11
AB2
A
1345 1358Right-handed alpha
Helix 12
AB3
A
1395 1409Right-handed alpha
Helix 13
AB4
A
1435 1438Right-handed 310
Helix 14
AB5
A
1439 1452Right-handed alpha
Helix 15
AB6
A
1462 1487Right-handed alpha
Helix 16
AB7
A
1490 1517Right-handed alpha
Helix 17
AB8
A
1523 1544Right-handed alpha
Helix 18
AB9
A
1552 1556Right-handed 310
Helix 19
AC1
A
1557 1562Right-handed 310
Helix 20
AC2
A
1574 1577Right-handed 310
Helix 21
AC3
A
1578 1584Right-handed alpha
Helix 22
AC4
A
1585 1588Right-handed 310
Helix 23
AC5
A
1608 1615Right-handed alpha
Helix 24
AC6
A
1619 1628Right-handed alpha
Helix 25
AC7
A
1629 1632Right-handed 310
Helix 26
AC8
A
1642 1654Right-handed alpha
Helix 27
AC9
A
1663 1668Right-handed alpha
Helix 28
AD1
A
1670 1679Right-handed 310
Helix 29
AD2
A
1701 1719Right-handed alpha
Helix 30
AD3
A
1734 1750Right-handed alpha
Helix 31
AD4
A
1752 1756Right-handed alpha
Helix 32
AD5
A
1762 1766Right-handed 310
Helix 33
AD6
A
1786 1790Right-handed 310
Helix 34
AD7
A
1791 1800Right-handed alpha
Helix 35
AD8
A
1811 1816Right-handed alpha
Helix 36
AD9
A
1818 1831Right-handed alpha
Helix 37
AE1
A
1838 1843Right-handed alpha
Helix 38
AE2
A
1851 1857Right-handed alpha
Helix 39
AE3
B
1107 1116Right-handed alpha
Helix 40
AE4
B
1141 1168Right-handed alpha
Helix 41
AE5
B
1195 1202Right-handed alpha
Helix 42
AE6
B
1216 1220Right-handed 310
Helix 43
AE7
B
1253 1257Right-handed 310
Helix 44
AE8
B
1271 1283Right-handed alpha
Helix 45
AE9
B
1284 1287Right-handed 310
Helix 46
AF1
B
1289 1296Right-handed alpha
Helix 47
AF2
B
1305 1317Right-handed alpha
Helix 48
AF3
B
1319 1332Right-handed alpha
Helix 49
AF4
B
1345 1359Right-handed alpha
Helix 50
AF5
B
1395 1408Right-handed alpha
Helix 51
AF6
B
1435 1438Right-handed 310
Helix 52
AF7
B
1439 1455Right-handed alpha
Helix 53
AF8
B
1459 1488Right-handed alpha
Helix 54
AF9
B
1490 1518Right-handed alpha
Helix 55
AG1
B
1519 1521Right-handed 310
Helix 56
AG2
B
1522 1544Right-handed alpha
Helix 57
AG3
B
1552 1556Right-handed 310
Helix 58
AG4
B
1557 1562Right-handed 310
Helix 59
AG5
B
1574 1577Right-handed 310
Helix 60
AG6
B
1578 1584Right-handed alpha
Helix 61
AG7
B
1585 1588Right-handed 310
Helix 62
AG8
B
1608 1615Right-handed alpha
Helix 63
AG9
B
1619 1628Right-handed alpha
Helix 64
AH1
B
1629 1632Right-handed 310
Helix 65
AH2
B
1642 1654Right-handed alpha
Helix 66
AH3
B
1663 1668Right-handed alpha
Helix 67
AH4
B
1670 1679Right-handed 310
Helix 68
AH5
B
1694 1697Right-handed 310
Helix 69
AH6
B
1701 1719Right-handed alpha
Helix 70
AH7
B
1734 1750Right-handed alpha
Helix 71
AH8
B
1752 1756Right-handed alpha
Helix 72
AH9
B
1762 1766Right-handed 310
Helix 73
AI1
B
1786 1790Right-handed 310
Helix 74
AI2
B
1791 1800Right-handed alpha
Helix 75
AI3
B
1811 1816Right-handed alpha
Helix 76
AI4
B
1818 1831Right-handed alpha
Helix 77
AI5
B
1838 1843Right-handed alpha
Helix 78
AI6
B
1851 1857Right-handed alpha
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There are 12 sheets in PDB entry 8FTM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1173 1183first strand
Strand 2
A
1186 1194anti-parallel
Strand 3
A
1239 1247anti-parallel
Strand 4
A
1225 1235anti-parallel
Strand 5
A
1207 1212anti-parallel
Strand 6
A
1262 1270anti-parallel
Strand 7
A
1173 1183anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1422 1424first strand
Strand 2
A
1546 1550parallel
Strand 3
A
1389 1393parallel
Strand 4
A
1568 1572parallel
Strand 5
A
1592 1597parallel
Strand 6
A
1334 1339parallel
Strand 7
A
1633 1634parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1410 1411first strand
Strand 2
A
1417 1418anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1637 1638first strand
Strand 2
A
1659 1660parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1757 1760first strand
Strand 2
A
1728 1731parallel
Strand 3
A
1770 1776parallel
Strand 4
A
1802 1810parallel
Strand 5
A
1681 1685parallel
Strand 6
A
1834 1835parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1691 1692first strand
Strand 2
A
1699 1700anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1173 1183first strand
Strand 2
B
1186 1194anti-parallel
Strand 3
B
1239 1247anti-parallel
Strand 4
B
1225 1235anti-parallel
Strand 5
B
1207 1212anti-parallel
Strand 6
B
1262 1270anti-parallel
Strand 7
B
1173 1183anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1422 1424first strand
Strand 2
B
1546 1550parallel
Strand 3
B
1389 1393parallel
Strand 4
B
1568 1572parallel
Strand 5
B
1592 1597parallel
Strand 6
B
1334 1339parallel
Strand 7
B
1633 1634parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1410 1411first strand
Strand 2
B
1417 1418anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1637 1638first strand
Strand 2
B
1659 1660parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1757 1760first strand
Strand 2
B
1728 1731parallel
Strand 3
B
1770 1776parallel
Strand 4
B
1802 1810parallel
Strand 5
B
1681 1685parallel
Strand 6
B
1834 1835parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1691 1692first strand
Strand 2
B
1699 1700anti-parallel
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