Analysis of interatomic Contacts of Structural Units in PDB entry:
8FU9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FU9 entry

There are 3 chains in PDB entry 8FU9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	ASP 1126
B	GLN 14	LEU 1125
C	GLN 14	ASP 1126

There are 66 helices in PDB entry 8FU9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	83	87	Right-handed 310
Helix 2	AA2	A	133	137	Right-handed 310
Helix 3	AA3	A	278	284	Right-handed alpha
Helix 4	AA4	A	318	323	Right-handed alpha
Helix 5	AA5	A	345	351	Right-handed alpha
Helix 6	AA6	A	396	402	Right-handed alpha
Helix 7	AA7	A	421	425	Right-handed 310
Helix 8	AA8	A	717	724	Right-handed alpha
Helix 9	AA9	A	726	734	Right-handed alpha
Helix 10	AB1	A	738	763	Right-handed alpha
Helix 11	AB2	A	796	804	Right-handed alpha
Helix 12	AB3	A	846	864	Right-handed alpha
Helix 13	AB4	A	866	870	Right-handed 310
Helix 14	AB5	A	877	887	Right-handed alpha
Helix 15	AB6	A	893	899	Right-handed alpha
Helix 16	AB7	A	899	919	Right-handed alpha
Helix 17	AB8	A	921	924	Right-handed 310
Helix 18	AB9	A	925	945	Right-handed alpha
Helix 19	AC1	A	946	948	Right-handed 310
Helix 20	AC2	A	956	964	Right-handed alpha
Helix 21	AC3	A	965	1013	Right-handed alpha
Helix 22	AC4	A	1121	1126	Right-handed alpha
Helix 23	AC5	B	83	87	Right-handed 310
Helix 24	AC6	B	133	137	Right-handed 310
Helix 25	AC7	B	274	283	Right-handed alpha
Helix 26	AC8	B	318	323	Right-handed alpha
Helix 27	AC9	B	366	370	Right-handed 310
Helix 28	AD1	B	397	401	Right-handed 310
Helix 29	AD2	B	419	421	Right-handed 310
Helix 30	AD3	B	596	600	Right-handed 310
Helix 31	AD4	B	717	723	Right-handed alpha
Helix 32	AD5	B	726	734	Right-handed alpha
Helix 33	AD6	B	735	737	Right-handed 310
Helix 34	AD7	B	738	762	Right-handed alpha
Helix 35	AD8	B	796	806	Right-handed alpha
Helix 36	AD9	B	846	865	Right-handed alpha
Helix 37	AE1	B	866	870	Right-handed 310
Helix 38	AE2	B	877	888	Right-handed alpha
Helix 39	AE3	B	892	898	Right-handed alpha
Helix 40	AE4	B	899	920	Right-handed alpha
Helix 41	AE5	B	925	945	Right-handed alpha
Helix 42	AE6	B	946	948	Right-handed 310
Helix 43	AE7	B	956	964	Right-handed alpha
Helix 44	AE8	B	965	1013	Right-handed alpha
Helix 45	AE9	C	83	87	Right-handed 310
Helix 46	AF1	C	274	283	Right-handed alpha
Helix 47	AF2	C	318	322	Right-handed 310
Helix 48	AF3	C	345	350	Right-handed alpha
Helix 49	AF4	C	366	370	Right-handed 310
Helix 50	AF5	C	396	401	Right-handed alpha
Helix 51	AF6	C	717	723	Right-handed alpha
Helix 52	AF7	C	726	734	Right-handed alpha
Helix 53	AF8	C	735	737	Right-handed 310
Helix 54	AF9	C	738	763	Right-handed alpha
Helix 55	AG1	C	796	806	Right-handed alpha
Helix 56	AG2	C	848	864	Right-handed alpha
Helix 57	AG3	C	866	870	Right-handed 310
Helix 58	AG4	C	877	888	Right-handed alpha
Helix 59	AG5	C	892	899	Right-handed alpha
Helix 60	AG6	C	899	913	Right-handed alpha
Helix 61	AG7	C	913	918	Right-handed alpha
Helix 62	AG8	C	921	924	Right-handed 310
Helix 63	AG9	C	925	945	Right-handed alpha
Helix 64	AH1	C	956	964	Right-handed alpha
Helix 65	AH2	C	965	1013	Right-handed alpha
Helix 66	AH3	C	1121	1125	Right-handed 310

There are 41 sheets in PDB entry 8FU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	29	first strand
Strand 2	A	62	65	anti-parallel
Strand 3	A	245	249	anti-parallel
Strand 4	A	76	80	anti-parallel
Strand 5	A	175	182	anti-parallel
Strand 6	A	189	196	anti-parallel
Strand 7	A	207	212	anti-parallel
Strand 8	A	34	37	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	52	first strand
Strand 2	A	254	259	anti-parallel
Strand 3	A	265	270	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	93	first strand
Strand 2	A	225	227	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	299	first strand
Strand 2	A	572	579	anti-parallel
Strand 3	A	589	593	anti-parallel
Strand 4	A	628	631	anti-parallel
Strand 5	A	622	625	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	308	first strand
Strand 2	A	518	523	parallel
Strand 3	A	526	534	anti-parallel
Strand 4	A	564	568	anti-parallel
Strand 5	A	555	557	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	338	first strand
Strand 2	A	373	382	anti-parallel
Strand 3	A	488	496	anti-parallel
Strand 4	A	411	416	anti-parallel
Strand 5	A	356	360	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	342	first strand
Strand 2	A	504	505	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	546	547	first strand
Strand 2	B	42	43	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	634	635	first strand
Strand 2	A	671	676	parallel
Strand 3	A	650	655	anti-parallel
Strand 4	A	644	647	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	684	first strand
Strand 2	B	767	770	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	691	708	first strand
Strand 2	A	1039	1058	anti-parallel
Strand 3	A	1027	1036	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	691	708	first strand
Strand 2	A	1039	1058	anti-parallel
Strand 3	A	1074	1077	anti-parallel
Strand 4	A	1082	1085	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	716	first strand
Strand 2	A	838	841	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	767	770	first strand
Strand 2	C	681	684	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1100	1102	first strand
Strand 2	A	1066	1070	anti-parallel
Strand 3	A	1061	1063	anti-parallel
Strand 4	A	1113	1114	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	29	first strand
Strand 2	B	62	65	anti-parallel
Strand 3	B	245	249	anti-parallel
Strand 4	B	76	80	anti-parallel
Strand 5	B	175	181	anti-parallel
Strand 6	B	190	196	anti-parallel
Strand 7	B	211	214	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	51	first strand
Strand 2	B	255	259	anti-parallel
Strand 3	B	265	270	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	93	first strand
Strand 2	B	225	228	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	299	first strand
Strand 2	B	572	579	anti-parallel
Strand 3	B	589	593	anti-parallel
Strand 4	B	628	631	anti-parallel
Strand 5	B	622	625	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	338	first strand
Strand 2	B	375	382	anti-parallel
Strand 3	B	488	494	anti-parallel
Strand 4	B	411	417	anti-parallel
Strand 5	B	356	360	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	342	first strand
Strand 2	B	504	505	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	518	523	first strand
Strand 2	B	526	534	anti-parallel
Strand 3	B	564	568	anti-parallel
Strand 4	B	553	557	anti-parallel
Strand 5	B	545	547	anti-parallel
Strand 6	C	41	43	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	634	640	first strand
Strand 2	B	672	677	parallel
Strand 3	B	650	654	anti-parallel
Strand 4	B	644	647	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	681	684	first strand
Strand 2	C	767	770	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	691	708	first strand
Strand 2	B	1039	1057	anti-parallel
Strand 3	B	1027	1036	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	691	708	first strand
Strand 2	B	1039	1057	anti-parallel
Strand 3	B	1074	1077	anti-parallel
Strand 4	B	1082	1086	anti-parallel
Strand 5	B	1089	1094	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	716	first strand
Strand 2	B	838	841	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1100	1105	first strand
Strand 2	B	1066	1070	anti-parallel
Strand 3	B	1061	1062	anti-parallel
Strand 4	B	1113	1114	parallel

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There are 8 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	29	first strand
Strand 2	C	62	65	anti-parallel
Strand 3	C	245	249	anti-parallel
Strand 4	C	76	80	anti-parallel
Strand 5	C	175	182	anti-parallel
Strand 6	C	189	196	anti-parallel
Strand 7	C	208	212	anti-parallel
Strand 8	C	35	37	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	52	first strand
Strand 2	C	254	260	anti-parallel
Strand 3	C	264	270	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	93	first strand
Strand 2	C	225	227	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	117	first strand
Strand 2	C	156	158	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	291	299	first strand
Strand 2	C	572	579	anti-parallel
Strand 3	C	589	593	anti-parallel
Strand 4	C	628	631	anti-parallel
Strand 5	C	622	624	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	304	308	first strand
Strand 2	C	518	523	parallel
Strand 3	C	526	534	anti-parallel
Strand 4	C	564	568	anti-parallel
Strand 5	C	555	557	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	334	338	first strand
Strand 2	C	373	382	anti-parallel
Strand 3	C	488	496	anti-parallel
Strand 4	C	411	417	anti-parallel
Strand 5	C	356	360	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	342	first strand
Strand 2	C	504	505	parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	634	635	first strand
Strand 2	C	671	676	parallel
Strand 3	C	650	655	anti-parallel
Strand 4	C	644	647	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	691	708	first strand
Strand 2	C	1039	1058	anti-parallel
Strand 3	C	1027	1036	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	691	708	first strand
Strand 2	C	1039	1058	anti-parallel
Strand 3	C	1074	1077	anti-parallel
Strand 4	C	1082	1085	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	716	first strand
Strand 2	C	838	841	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1100	1105	first strand
Strand 2	C	1066	1070	anti-parallel
Strand 3	C	1061	1063	anti-parallel
Strand 4	C	1113	1114	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FU9

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FU9