Analysis of interatomic Contacts of Structural Units in PDB entry:
8FUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FUY entry

There are 2 chains in PDB entry 8FUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 56GLN 550
B
 CYS 56GLN 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 8FUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 69Right-handed 310
Helix 2
AA2
A
81 87Right-handed alpha
Helix 3
AA3
A
87 98Right-handed alpha
Helix 4
AA4
A
117 125Right-handed alpha
Helix 5
AA5
A
126 130Right-handed 310
Helix 6
AA6
A
136 138Right-handed 310
Helix 7
AA7
A
139 145Right-handed alpha
Helix 8
AA8
A
156 173Right-handed alpha
Helix 9
AA9
A
190 192Right-handed 310
Helix 10
AB1
A
193 205Right-handed alpha
Helix 11
AB2
A
224 236Right-handed alpha
Helix 12
AB3
A
240 242Right-handed 310
Helix 13
AB4
A
248 252Right-handed 310
Helix 14
AB5
A
253 265Right-handed alpha
Helix 15
AB6
A
266 273Right-handed alpha
Helix 16
AB7
A
294 300Right-handed alpha
Helix 17
AB8
A
301 308Right-handed alpha
Helix 18
AB9
A
310 321Right-handed alpha
Helix 19
AC1
A
328 341Right-handed alpha
Helix 20
AC2
A
347 349Right-handed 310
Helix 21
AC3
A
425 429Right-handed 310
Helix 22
AC4
A
482 493Right-handed alpha
Helix 23
AC5
A
500 520Right-handed alpha
Helix 24
AC6
A
535 546Right-handed alpha
Helix 25
AC7
B
64 69Right-handed 310
Helix 26
AC8
B
81 87Right-handed alpha
Helix 27
AC9
B
87 98Right-handed alpha
Helix 28
AD1
B
120 125Right-handed alpha
Helix 29
AD2
B
126 130Right-handed 310
Helix 30
AD3
B
136 138Right-handed 310
Helix 31
AD4
B
139 145Right-handed alpha
Helix 32
AD5
B
156 173Right-handed alpha
Helix 33
AD6
B
190 192Right-handed 310
Helix 34
AD7
B
193 205Right-handed alpha
Helix 35
AD8
B
224 236Right-handed alpha
Helix 36
AD9
B
248 252Right-handed 310
Helix 37
AE1
B
253 265Right-handed alpha
Helix 38
AE2
B
266 271Right-handed alpha
Helix 39
AE3
B
294 300Right-handed alpha
Helix 40
AE4
B
301 308Right-handed alpha
Helix 41
AE5
B
310 321Right-handed alpha
Helix 42
AE6
B
328 341Right-handed alpha
Helix 43
AE7
B
347 349Right-handed 310
Helix 44
AE8
B
425 429Right-handed 310
Helix 45
AE9
B
481 493Right-handed alpha
Helix 46
AF1
B
500 521Right-handed alpha
Helix 47
AF2
B
535 546Right-handed alpha
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There are 3 sheets in PDB entry 8FUY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 151first strand
Strand 2
A
106 111parallel
Strand 3
A
72 77parallel
Strand 4
A
182 187parallel
Strand 5
A
213 217parallel
Strand 6
A
244 246parallel
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There are 18 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 529first strand
Strand 2
A
351 357parallel
Strand 3
A
382 388anti-parallel
Strand 4
A
398 404anti-parallel
Strand 5
A
278 286parallel
Strand 6
A
411 418anti-parallel
Strand 7
A
433 439anti-parallel
Strand 8
A
443 451anti-parallel
Strand 9
A
462 469anti-parallel
Strand 10
B
462 469anti-parallel
Strand 11
B
443 451anti-parallel
Strand 12
B
433 439anti-parallel
Strand 13
B
411 418anti-parallel
Strand 14
B
278 286anti-parallel
Strand 15
B
399 404parallel
Strand 16
B
382 387anti-parallel
Strand 17
B
351 357anti-parallel
Strand 18
B
526 529parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 151first strand
Strand 2
B
105 111parallel
Strand 3
B
72 77parallel
Strand 4
B
182 187parallel
Strand 5
B
213 218parallel
Strand 6
B
244 247parallel
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