Analysis of interatomic Contacts of Structural Units in PDB entry:
8FW5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FW5 entry

There are 9 chains in PDB entry 8FW5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 6	HIS 1599
B	ARG 6	LYS 380
C	SER 6	LEU 567
D	MET 1	SER 301
E	ARG 4	THR 314
F	ARG 41	ASP 130
G	MET 1	VAL 160
H	MET 1	LEU 117
I	MET 1	THR 81

There are 99 helices in PDB entry 8FW5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	71	77	Right-handed alpha
Helix 2	AA2	A	110	121	Right-handed alpha
Helix 3	AA3	A	178	183	Right-handed 310
Helix 4	AA4	A	190	211	Right-handed alpha
Helix 5	AA5	A	266	268	Right-handed 310
Helix 6	AA6	A	269	280	Right-handed alpha
Helix 7	AA7	A	280	285	Right-handed alpha
Helix 8	AA8	A	305	319	Right-handed alpha
Helix 9	AA9	A	346	360	Right-handed alpha
Helix 10	AB1	A	629	639	Right-handed alpha
Helix 11	AB2	A	659	670	Right-handed alpha
Helix 12	AB3	A	743	749	Right-handed alpha
Helix 13	AB4	A	762	769	Right-handed alpha
Helix 14	AB5	A	794	810	Right-handed alpha
Helix 15	AB6	A	917	927	Right-handed alpha
Helix 16	AB7	A	931	940	Right-handed 310
Helix 17	AB8	A	952	962	Right-handed alpha
Helix 18	AB9	A	978	994	Right-handed alpha
Helix 19	AC1	A	1178	1185	Right-handed alpha
Helix 20	AC2	A	1207	1217	Right-handed alpha
Helix 21	AC3	A	1223	1237	Right-handed alpha
Helix 22	AC4	A	1394	1412	Right-handed alpha
Helix 23	AC5	A	1464	1480	Right-handed alpha
Helix 24	AC6	A	1567	1581	Right-handed alpha
Helix 25	AC7	A	1582	1584	Right-handed 310
Helix 26	AC8	A	1585	1596	Right-handed alpha
Helix 27	AC9	B	33	40	Right-handed alpha
Helix 28	AD1	B	98	117	Right-handed alpha
Helix 29	AD2	B	121	126	Right-handed alpha
Helix 30	AD3	B	127	141	Right-handed alpha
Helix 31	AD4	B	180	184	Right-handed 310
Helix 32	AD5	B	185	189	Right-handed 310
Helix 33	AD6	B	190	197	Right-handed alpha
Helix 34	AD7	B	198	200	Right-handed 310
Helix 35	AD8	B	205	213	Right-handed alpha
Helix 36	AD9	B	216	230	Right-handed alpha
Helix 37	AE1	B	251	256	Right-handed alpha
Helix 38	AE2	B	257	268	Right-handed alpha
Helix 39	AE3	B	277	287	Right-handed alpha
Helix 40	AE4	B	293	301	Right-handed alpha
Helix 41	AE5	B	309	320	Right-handed alpha
Helix 42	AE6	B	350	358	Right-handed alpha
Helix 43	AE7	B	361	370	Right-handed alpha
Helix 44	AE8	C	65	74	Right-handed alpha
Helix 45	AE9	C	76	80	Right-handed 310
Helix 46	AF1	C	135	161	Right-handed alpha
Helix 47	AF2	C	161	173	Right-handed alpha
Helix 48	AF3	C	193	198	Right-handed alpha
Helix 49	AF4	C	198	213	Right-handed alpha
Helix 50	AF5	C	266	274	Right-handed alpha
Helix 51	AF6	C	279	289	Right-handed alpha
Helix 52	AF7	C	294	302	Right-handed alpha
Helix 53	AF8	C	305	319	Right-handed alpha
Helix 54	AF9	C	346	356	Right-handed alpha
Helix 55	AG1	C	360	368	Right-handed alpha
Helix 56	AG2	C	374	378	Right-handed alpha
Helix 57	AG3	C	383	400	Right-handed alpha
Helix 58	AG4	C	481	488	Right-handed alpha
Helix 59	AG5	C	491	501	Right-handed alpha
Helix 60	AG6	C	502	505	Right-handed 310
Helix 61	AG7	C	506	516	Right-handed alpha
Helix 62	AG8	C	525	533	Right-handed alpha
Helix 63	AG9	C	536	547	Right-handed alpha
Helix 64	AH1	D	14	23	Right-handed alpha
Helix 65	AH2	D	28	34	Right-handed 310
Helix 66	AH3	D	61	69	Right-handed alpha
Helix 67	AH4	D	72	77	Right-handed alpha
Helix 68	AH5	D	93	112	Right-handed alpha
Helix 69	AH6	D	123	127	Right-handed 310
Helix 70	AH7	D	128	132	Right-handed 310
Helix 71	AH8	D	135	147	Right-handed alpha
Helix 72	AH9	D	162	176	Right-handed alpha
Helix 73	AI1	D	178	193	Right-handed alpha
Helix 74	AI2	D	223	242	Right-handed alpha
Helix 75	AI3	D	279	301	Right-handed alpha
Helix 76	AI4	E	15	23	Right-handed alpha
Helix 77	AI5	E	69	76	Right-handed alpha
Helix 78	AI6	E	90	108	Right-handed alpha
Helix 79	AI7	E	124	147	Right-handed alpha
Helix 80	AI8	E	163	177	Right-handed alpha
Helix 81	AI9	E	179	195	Right-handed alpha
Helix 82	AJ1	E	218	240	Right-handed alpha
Helix 83	AJ2	E	291	310	Right-handed alpha
Helix 84	AJ3	F	42	60	Right-handed alpha
Helix 85	AJ4	F	81	88	Right-handed alpha
Helix 86	AJ5	F	105	125	Right-handed alpha
Helix 87	AJ6	G	3	13	Right-handed alpha
Helix 88	AJ7	G	42	68	Right-handed alpha
Helix 89	AJ8	G	72	76	Right-handed 310
Helix 90	AJ9	G	80	86	Right-handed alpha
Helix 91	AK1	G	134	153	Right-handed alpha
Helix 92	AK2	G	154	156	Right-handed 310
Helix 93	AK3	H	2	10	Right-handed alpha
Helix 94	AK4	H	38	54	Right-handed alpha
Helix 95	AK5	H	55	57	Right-handed 310
Helix 96	AK6	H	96	101	Right-handed alpha
Helix 97	AK7	H	103	117	Right-handed alpha
Helix 98	AK8	I	2	13	Right-handed alpha
Helix 99	AK9	I	40	45	Right-handed alpha

There are 24 sheets in PDB entry 8FW5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	24	first strand
Strand 2	A	66	70	anti-parallel
Strand 3	A	7	12	parallel
Strand 4	A	84	90	anti-parallel
Strand 5	A	38	42	anti-parallel
Strand 6	A	51	54	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	134	first strand
Strand 2	A	137	145	anti-parallel
Strand 3	A	150	151	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	134	first strand
Strand 2	A	137	145	anti-parallel
Strand 3	A	99	104	anti-parallel
Strand 4	A	161	166	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	244	first strand
Strand 2	A	250	259	anti-parallel
Strand 3	A	217	226	anti-parallel
Strand 4	A	169	176	parallel
Strand 5	A	330	337	parallel
Strand 6	A	363	367	parallel
Strand 7	A	406	407	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	298	first strand
Strand 2	A	217	226	anti-parallel
Strand 3	A	250	259	anti-parallel
Strand 4	A	886	893	parallel
Strand 5	A	902	908	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	344	first strand
Strand 2	A	379	381	parallel
Strand 3	A	397	398	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	756	757	first strand
Strand 2	A	812	814	parallel
Strand 3	A	851	856	anti-parallel
Strand 4	A	859	865	anti-parallel
Strand 5	A	870	877	anti-parallel
Strand 6	A	770	777	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1351	1357	first strand
Strand 2	A	1369	1375	anti-parallel
Strand 3	A	1384	1390	anti-parallel
Strand 4	A	942	950	anti-parallel
Strand 5	A	1414	1419	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1204	1206	first strand
Strand 2	A	1257	1260	anti-parallel
Strand 3	A	1240	1242	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1254	1255	first strand
Strand 2	A	1296	1298	anti-parallel
Strand 3	A	1377	1378	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1439	1442	first strand
Strand 2	A	1545	1550	anti-parallel
Strand 3	A	1509	1512	anti-parallel
Strand 4	A	1501	1504	anti-parallel
Strand 5	A	1482	1485	anti-parallel

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There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	26	first strand
Strand 2	B	9	15	anti-parallel
Strand 3	B	83	90	anti-parallel
Strand 4	B	62	65	anti-parallel
Strand 5	B	56	58	anti-parallel
Strand 6	C	84	87	anti-parallel
Strand 7	C	91	95	anti-parallel
Strand 8	C	121	131	anti-parallel
Strand 9	C	9	16	anti-parallel
Strand 10	C	21	25	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	26	first strand
Strand 2	B	9	15	anti-parallel
Strand 3	B	83	90	anti-parallel
Strand 4	B	62	65	anti-parallel
Strand 5	B	56	58	anti-parallel
Strand 6	C	84	87	anti-parallel
Strand 7	C	91	95	anti-parallel
Strand 8	C	121	131	anti-parallel
Strand 9	C	98	99	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	148	first strand
Strand 2	B	154	158	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	177	first strand
Strand 2	B	233	236	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	247	first strand
Strand 2	B	323	329	anti-parallel
Strand 3	B	378	380	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	260	263	first strand
Strand 2	C	322	325	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	372	373	first strand
Strand 2	C	333	336	anti-parallel
Strand 3	C	403	412	anti-parallel
Strand 4	C	551	557	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	46	first strand
Strand 2	D	52	58	anti-parallel
Strand 3	D	2	9	parallel
Strand 4	D	82	88	parallel
Strand 5	D	116	122	parallel
Strand 6	D	151	156	parallel

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There are 10 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	213	first strand
Strand 2	D	197	202	anti-parallel
Strand 3	D	267	273	anti-parallel
Strand 4	D	257	262	anti-parallel
Strand 5	D	246	252	anti-parallel
Strand 6	E	258	263	anti-parallel
Strand 7	E	267	273	anti-parallel
Strand 8	E	278	285	anti-parallel
Strand 9	E	198	203	anti-parallel
Strand 10	E	208	212	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	56	first strand
Strand 2	E	5	10	parallel
Strand 3	E	77	85	parallel
Strand 4	E	112	118	parallel
Strand 5	E	153	157	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	100	102	first strand
Strand 2	I	52	56	anti-parallel
Strand 3	I	62	69	anti-parallel
Strand 4	I	72	79	anti-parallel
Strand 5	I	19	24	anti-parallel
Strand 6	I	28	33	anti-parallel

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There are 9 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	31	34	first strand
Strand 2	G	22	25	anti-parallel
Strand 3	G	123	128	anti-parallel
Strand 4	G	102	108	anti-parallel
Strand 5	G	93	98	anti-parallel
Strand 6	H	62	67	anti-parallel
Strand 7	H	75	77	anti-parallel
Strand 8	H	92	94	anti-parallel
Strand 9	H	17	19	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	80	81	first strand
Strand 2	H	88	89	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FW5

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FW5