Analysis of interatomic Contacts of Structural Units in PDB entry:
8FW9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FW9 entry

There are 3 chains in PDB entry 8FW9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 94	ALA 1024
B	SER 94	ALA 1024
C	SER 94	ALA 1024

There are134 helices in PDB entry 8FW9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	94	109	Right-handed alpha
Helix 2	AA2	A	111	115	Right-handed alpha
Helix 3	AA3	A	157	161	Right-handed 310
Helix 4	AA4	A	178	189	Right-handed alpha
Helix 5	AA5	A	191	195	Right-handed 310
Helix 6	AA6	A	206	208	Right-handed 310
Helix 7	AA7	A	211	220	Right-handed alpha
Helix 8	AA8	A	230	240	Right-handed alpha
Helix 9	AA9	A	249	253	Right-handed 310
Helix 10	AB1	A	258	267	Right-handed alpha
Helix 11	AB2	A	283	287	Right-handed 310
Helix 12	AB3	A	301	312	Right-handed alpha
Helix 13	AB4	A	314	328	Right-handed alpha
Helix 14	AB5	A	329	335	Right-handed alpha
Helix 15	AB6	A	337	349	Right-handed alpha
Helix 16	AB7	A	358	374	Right-handed alpha
Helix 17	AB8	A	375	378	Right-handed 310
Helix 18	AB9	A	382	404	Right-handed alpha
Helix 19	AC1	A	409	413	Right-handed 310
Helix 20	AC2	A	415	417	Right-handed 310
Helix 21	AC3	A	418	425	Right-handed alpha
Helix 22	AC4	A	443	460	Right-handed alpha
Helix 23	AC5	A	463	475	Right-handed alpha
Helix 24	AC6	A	479	484	Right-handed alpha
Helix 25	AC7	A	487	498	Right-handed alpha
Helix 26	AC8	A	498	511	Right-handed alpha
Helix 27	AC9	A	541	565	Right-handed alpha
Helix 28	AD1	A	573	580	Right-handed alpha
Helix 29	AD2	A	593	602	Right-handed alpha
Helix 30	AD3	A	605	609	Right-handed 310
Helix 31	AD4	A	645	653	Right-handed alpha
Helix 32	AD5	A	673	686	Right-handed alpha
Helix 33	AD6	A	703	709	Right-handed alpha
Helix 34	AD7	A	725	735	Right-handed alpha
Helix 35	AD8	A	779	789	Right-handed alpha
Helix 36	AD9	A	807	815	Right-handed alpha
Helix 37	AE1	A	833	843	Right-handed alpha
Helix 38	AE2	A	863	873	Right-handed alpha
Helix 39	AE3	A	891	894	Right-handed 310
Helix 40	AE4	A	895	904	Right-handed alpha
Helix 41	AE5	A	920	931	Right-handed alpha
Helix 42	AE6	A	954	958	Right-handed 310
Helix 43	AE7	A	980	993	Right-handed alpha
Helix 44	AE8	A	1008	1015	Right-handed alpha
Helix 45	AE9	B	95	109	Right-handed alpha
Helix 46	AF1	B	111	115	Right-handed alpha
Helix 47	AF2	B	157	161	Right-handed 310
Helix 48	AF3	B	178	189	Right-handed alpha
Helix 49	AF4	B	191	195	Right-handed 310
Helix 50	AF5	B	211	220	Right-handed alpha
Helix 51	AF6	B	231	240	Right-handed alpha
Helix 52	AF7	B	249	253	Right-handed 310
Helix 53	AF8	B	258	267	Right-handed alpha
Helix 54	AF9	B	268	271	Right-handed 310
Helix 55	AG1	B	283	287	Right-handed 310
Helix 56	AG2	B	301	312	Right-handed alpha
Helix 57	AG3	B	314	328	Right-handed alpha
Helix 58	AG4	B	330	335	Right-handed alpha
Helix 59	AG5	B	342	347	Right-handed alpha
Helix 60	AG6	B	358	374	Right-handed alpha
Helix 61	AG7	B	375	378	Right-handed 310
Helix 62	AG8	B	382	403	Right-handed alpha
Helix 63	AG9	B	409	413	Right-handed 310
Helix 64	AH1	B	415	417	Right-handed 310
Helix 65	AH2	B	418	425	Right-handed alpha
Helix 66	AH3	B	443	460	Right-handed alpha
Helix 67	AH4	B	463	475	Right-handed alpha
Helix 68	AH5	B	479	484	Right-handed alpha
Helix 69	AH6	B	487	498	Right-handed alpha
Helix 70	AH7	B	498	512	Right-handed alpha
Helix 71	AH8	B	541	564	Right-handed alpha
Helix 72	AH9	B	573	578	Right-handed alpha
Helix 73	AI1	B	593	602	Right-handed alpha
Helix 74	AI2	B	605	609	Right-handed 310
Helix 75	AI3	B	645	653	Right-handed alpha
Helix 76	AI4	B	673	686	Right-handed alpha
Helix 77	AI5	B	703	709	Right-handed alpha
Helix 78	AI6	B	725	735	Right-handed alpha
Helix 79	AI7	B	778	788	Right-handed alpha
Helix 80	AI8	B	807	815	Right-handed alpha
Helix 81	AI9	B	833	844	Right-handed alpha
Helix 82	AJ1	B	863	873	Right-handed alpha
Helix 83	AJ2	B	891	894	Right-handed 310
Helix 84	AJ3	B	895	904	Right-handed alpha
Helix 85	AJ4	B	920	931	Right-handed alpha
Helix 86	AJ5	B	954	958	Right-handed 310
Helix 87	AJ6	B	980	993	Right-handed alpha
Helix 88	AJ7	B	1008	1013	Right-handed alpha
Helix 89	AJ8	C	95	109	Right-handed alpha
Helix 90	AJ9	C	111	115	Right-handed alpha
Helix 91	AK1	C	157	161	Right-handed 310
Helix 92	AK2	C	178	189	Right-handed alpha
Helix 93	AK3	C	191	195	Right-handed 310
Helix 94	AK4	C	206	208	Right-handed 310
Helix 95	AK5	C	211	220	Right-handed alpha
Helix 96	AK6	C	230	240	Right-handed alpha
Helix 97	AK7	C	249	253	Right-handed 310
Helix 98	AK8	C	258	267	Right-handed alpha
Helix 99	AK9	C	268	271	Right-handed 310
Helix 100	AL1	C	283	287	Right-handed 310
Helix 101	AL2	C	301	312	Right-handed alpha
Helix 102	AL3	C	314	328	Right-handed alpha
Helix 103	AL4	C	330	335	Right-handed alpha
Helix 104	AL5	C	337	345	Right-handed alpha
Helix 105	AL6	C	358	374	Right-handed alpha
Helix 106	AL7	C	375	378	Right-handed 310
Helix 107	AL8	C	382	403	Right-handed alpha
Helix 108	AL9	C	409	413	Right-handed 310
Helix 109	AM1	C	415	417	Right-handed 310
Helix 110	AM2	C	418	425	Right-handed alpha
Helix 111	AM3	C	443	460	Right-handed alpha
Helix 112	AM4	C	463	475	Right-handed alpha
Helix 113	AM5	C	479	484	Right-handed alpha
Helix 114	AM6	C	487	498	Right-handed alpha
Helix 115	AM7	C	498	511	Right-handed alpha
Helix 116	AM8	C	541	565	Right-handed alpha
Helix 117	AM9	C	573	580	Right-handed alpha
Helix 118	AN1	C	592	602	Right-handed alpha
Helix 119	AN2	C	605	609	Right-handed 310
Helix 120	AN3	C	645	653	Right-handed alpha
Helix 121	AN4	C	673	686	Right-handed alpha
Helix 122	AN5	C	703	709	Right-handed alpha
Helix 123	AN6	C	725	735	Right-handed alpha
Helix 124	AN7	C	778	788	Right-handed alpha
Helix 125	AN8	C	807	815	Right-handed alpha
Helix 126	AN9	C	833	843	Right-handed alpha
Helix 127	AO1	C	844	846	Right-handed 310
Helix 128	AO2	C	863	873	Right-handed alpha
Helix 129	AO3	C	891	894	Right-handed 310
Helix 130	AO4	C	895	904	Right-handed alpha
Helix 131	AO5	C	920	931	Right-handed alpha
Helix 132	AO6	C	954	958	Right-handed 310
Helix 133	AO7	C	980	993	Right-handed alpha
Helix 134	AO8	C	1008	1015	Right-handed alpha

There are 20 sheets in PDB entry 8FW9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	128	129	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	138	140	anti-parallel
Strand 3	A	293	297	anti-parallel
Strand 4	A	165	168	parallel
Strand 5	A	274	279	parallel
Strand 6	A	243	248	parallel
Strand 7	A	199	204	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	430	first strand
Strand 2	A	438	441	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	583	587	first strand
Strand 2	A	611	615	parallel
Strand 3	A	662	666	parallel
Strand 4	A	690	695	parallel
Strand 5	A	714	720	parallel
Strand 6	A	740	744	parallel
Strand 7	A	767	771	parallel
Strand 8	A	795	799	parallel
Strand 9	A	824	828	parallel
Strand 10	A	852	853	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	859	860	first strand
Strand 2	A	888	889	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	884	886	first strand
Strand 2	A	911	914	parallel
Strand 3	A	941	943	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	117	first strand
Strand 2	B	128	129	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	153	first strand
Strand 2	B	138	140	anti-parallel
Strand 3	B	293	297	anti-parallel
Strand 4	B	165	168	parallel
Strand 5	B	274	279	parallel
Strand 6	B	243	248	parallel
Strand 7	B	199	204	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	427	430	first strand
Strand 2	B	438	441	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	583	587	first strand
Strand 2	B	611	615	parallel
Strand 3	B	659	666	parallel
Strand 4	B	687	695	parallel
Strand 5	B	714	720	parallel
Strand 6	B	740	744	parallel
Strand 7	B	767	773	parallel
Strand 8	B	795	801	parallel
Strand 9	B	824	828	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	859	860	first strand
Strand 2	B	888	889	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	884	885	first strand
Strand 2	B	911	913	parallel
Strand 3	B	941	943	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1000	1001	first strand
Strand 2	B	1021	1022	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	117	first strand
Strand 2	C	128	129	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	153	first strand
Strand 2	C	138	140	anti-parallel
Strand 3	C	293	297	anti-parallel
Strand 4	C	165	168	parallel
Strand 5	C	274	279	parallel
Strand 6	C	243	248	parallel
Strand 7	C	199	204	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	427	430	first strand
Strand 2	C	438	441	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	583	587	first strand
Strand 2	C	611	615	parallel
Strand 3	C	662	666	parallel
Strand 4	C	690	694	parallel
Strand 5	C	714	719	parallel
Strand 6	C	740	744	parallel
Strand 7	C	767	771	parallel
Strand 8	C	795	799	parallel
Strand 9	C	824	828	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	859	860	first strand
Strand 2	C	888	889	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	884	885	first strand
Strand 2	C	911	913	parallel
Strand 3	C	941	943	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1000	1001	first strand
Strand 2	C	1021	1022	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FW9

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FW9