Analysis of interatomic Contacts of Structural Units in PDB entry:
8FWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FWK entry

There are 2 chains in PDB entry 8FWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 234GLU 830
A
 ALA 234GLU 830
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 8FWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
239 245Right-handed alpha
Helix 2
AA2
B
261 294Right-handed alpha
Helix 3
AA3
B
298 301Right-handed 310
Helix 4
AA4
B
302 315Right-handed alpha
Helix 5
AA5
B
326 353Right-handed alpha
Helix 6
AA6
B
366 390Right-handed alpha
Helix 7
AA7
B
391 408Right-handed alpha
Helix 8
AA8
B
412 458Right-handed alpha
Helix 9
AA9
B
459 465Right-handed alpha
Helix 10
AB1
B
468 510Right-handed alpha
Helix 11
AB2
B
511 516Right-handed 310
Helix 12
AB3
B
527 541Right-handed alpha
Helix 13
AB4
B
544 548Right-handed 310
Helix 14
AB5
B
550 567Right-handed alpha
Helix 15
AB6
B
627 634Right-handed alpha
Helix 16
AB7
B
659 665Right-handed alpha
Helix 17
AB8
B
680 685Right-handed alpha
Helix 18
AB9
B
686 688Right-handed 310
Helix 19
AC1
B
698 703Right-handed alpha
Helix 20
AC2
B
705 710Right-handed alpha
Helix 21
AC3
B
729 742Right-handed alpha
Helix 22
AC4
B
758 770Right-handed alpha
Helix 23
AC5
B
807 814Right-handed alpha
Helix 24
AC6
B
817 829Right-handed alpha
Helix 25
AC7
A
239 245Right-handed alpha
Helix 26
AC8
A
261 294Right-handed alpha
Helix 27
AC9
A
298 301Right-handed 310
Helix 28
AD1
A
302 315Right-handed alpha
Helix 29
AD2
A
326 353Right-handed alpha
Helix 30
AD3
A
366 390Right-handed alpha
Helix 31
AD4
A
391 408Right-handed alpha
Helix 32
AD5
A
412 458Right-handed alpha
Helix 33
AD6
A
459 465Right-handed alpha
Helix 34
AD7
A
468 510Right-handed alpha
Helix 35
AD8
A
511 516Right-handed 310
Helix 36
AD9
A
527 541Right-handed alpha
Helix 37
AE1
A
544 548Right-handed 310
Helix 38
AE2
A
550 567Right-handed alpha
Helix 39
AE3
A
630 637Right-handed alpha
Helix 40
AE4
A
659 665Right-handed alpha
Helix 41
AE5
A
680 685Right-handed alpha
Helix 42
AE6
A
698 703Right-handed alpha
Helix 43
AE7
A
705 710Right-handed alpha
Helix 44
AE8
A
729 742Right-handed alpha
Helix 45
AE9
A
758 770Right-handed alpha
Helix 46
AF1
A
807 814Right-handed alpha
Helix 47
AF2
A
817 829Right-handed alpha
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There are 4 sheets in PDB entry 8FWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
590 591first strand
Strand 2
B
612 613anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
617 620first strand
Strand 2
B
777 780parallel
Strand 3
B
747 750parallel
Strand 4
B
666 669parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 591first strand
Strand 2
A
612 613anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 620first strand
Strand 2
A
777 781parallel
Strand 3
A
747 751parallel
Strand 4
A
666 669parallel
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