Analysis of interatomic Contacts of Structural Units in PDB entry:
8FWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FWU entry

There are 4 chains in PDB entry 8FWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 431	ALA 850
B	ARG 431	ALA 850
C	ARG 431	ALA 850
D	ARG 431	ALA 850

There are 60 helices in PDB entry 8FWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	461	475	Right-handed alpha
Helix 2	AA2	A	501	507	Right-handed alpha
Helix 3	AA3	A	520	525	Right-handed alpha
Helix 4	AA4	A	553	557	Right-handed 310
Helix 5	AA5	A	562	585	Right-handed alpha
Helix 6	AA6	A	608	620	Right-handed alpha
Helix 7	AA7	A	630	665	Right-handed alpha
Helix 8	AA8	A	670	675	Right-handed alpha
Helix 9	AA9	A	688	696	Right-handed alpha
Helix 10	AB1	A	703	712	Right-handed alpha
Helix 11	AB2	A	720	731	Right-handed alpha
Helix 12	AB3	A	739	746	Right-handed alpha
Helix 13	AB4	A	747	749	Right-handed 310
Helix 14	AB5	A	773	788	Right-handed alpha
Helix 15	AB6	A	789	800	Right-handed alpha
Helix 16	AB7	A	822	850	Right-handed alpha
Helix 17	AB8	B	461	474	Right-handed alpha
Helix 18	AB9	B	501	507	Right-handed alpha
Helix 19	AC1	B	520	525	Right-handed alpha
Helix 20	AC2	B	560	585	Right-handed alpha
Helix 21	AC3	B	607	620	Right-handed alpha
Helix 22	AC4	B	631	661	Right-handed alpha
Helix 23	AC5	B	671	677	Right-handed alpha
Helix 24	AC6	B	688	696	Right-handed alpha
Helix 25	AC7	B	699	712	Right-handed alpha
Helix 26	AC8	B	720	730	Right-handed alpha
Helix 27	AC9	B	739	746	Right-handed alpha
Helix 28	AD1	B	773	789	Right-handed alpha
Helix 29	AD2	B	789	799	Right-handed alpha
Helix 30	AD3	B	822	850	Right-handed alpha
Helix 31	AD4	C	461	475	Right-handed alpha
Helix 32	AD5	C	501	507	Right-handed alpha
Helix 33	AD6	C	520	525	Right-handed alpha
Helix 34	AD7	C	553	557	Right-handed 310
Helix 35	AD8	C	562	585	Right-handed alpha
Helix 36	AD9	C	608	620	Right-handed alpha
Helix 37	AE1	C	630	665	Right-handed alpha
Helix 38	AE2	C	670	675	Right-handed alpha
Helix 39	AE3	C	688	696	Right-handed alpha
Helix 40	AE4	C	703	712	Right-handed alpha
Helix 41	AE5	C	720	731	Right-handed alpha
Helix 42	AE6	C	739	746	Right-handed alpha
Helix 43	AE7	C	747	749	Right-handed 310
Helix 44	AE8	C	773	788	Right-handed alpha
Helix 45	AE9	C	789	800	Right-handed alpha
Helix 46	AF1	C	822	850	Right-handed alpha
Helix 47	AF2	D	461	474	Right-handed alpha
Helix 48	AF3	D	501	507	Right-handed alpha
Helix 49	AF4	D	520	525	Right-handed alpha
Helix 50	AF5	D	560	585	Right-handed alpha
Helix 51	AF6	D	607	620	Right-handed alpha
Helix 52	AF7	D	631	661	Right-handed alpha
Helix 53	AF8	D	671	677	Right-handed alpha
Helix 54	AF9	D	688	696	Right-handed alpha
Helix 55	AG1	D	699	712	Right-handed alpha
Helix 56	AG2	D	720	730	Right-handed alpha
Helix 57	AG3	D	739	746	Right-handed alpha
Helix 58	AG4	D	773	789	Right-handed alpha
Helix 59	AG5	D	789	799	Right-handed alpha
Helix 60	AG6	D	822	850	Right-handed alpha

There are 22 sheets in PDB entry 8FWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	435	first strand
Strand 2	A	478	480	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	490	first strand
Strand 2	A	499	500	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	767	768	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	536	first strand
Strand 2	A	762	764	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	683	first strand
Strand 2	A	733	738	parallel
Strand 3	A	538	543	anti-parallel
Strand 4	A	752	754	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	528	529	first strand
Strand 2	B	767	768	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	536	first strand
Strand 2	B	762	764	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	738	first strand
Strand 2	B	538	543	anti-parallel
Strand 3	B	752	755	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	684	685	first strand
Strand 2	B	717	718	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	435	first strand
Strand 2	C	478	480	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	490	first strand
Strand 2	C	499	500	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	528	529	first strand
Strand 2	C	767	768	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	536	first strand
Strand 2	C	762	764	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	683	first strand
Strand 2	C	733	738	parallel
Strand 3	C	538	543	anti-parallel
Strand 4	C	752	754	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	459	460	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	528	529	first strand
Strand 2	D	767	768	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	534	536	first strand
Strand 2	D	762	764	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	735	738	first strand
Strand 2	D	538	543	anti-parallel
Strand 3	D	752	755	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	684	685	first strand
Strand 2	D	717	718	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FWU