Analysis of interatomic Contacts of Structural Units in PDB entry:
8FWW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FWW entry

There are 4 chains in PDB entry 8FWW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 431	ALA 850
B	ARG 431	ALA 850
C	ARG 431	ALA 850
D	ARG 431	ALA 850

There are 58 helices in PDB entry 8FWW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	461	473	Right-handed alpha
Helix 2	AA2	A	499	507	Right-handed alpha
Helix 3	AA3	A	520	525	Right-handed alpha
Helix 4	AA4	A	553	557	Right-handed 310
Helix 5	AA5	A	560	585	Right-handed alpha
Helix 6	AA6	A	607	620	Right-handed alpha
Helix 7	AA7	A	630	665	Right-handed alpha
Helix 8	AA8	A	671	677	Right-handed alpha
Helix 9	AA9	A	688	696	Right-handed alpha
Helix 10	AB1	A	699	712	Right-handed alpha
Helix 11	AB2	A	720	731	Right-handed alpha
Helix 12	AB3	A	739	749	Right-handed alpha
Helix 13	AB4	A	774	788	Right-handed alpha
Helix 14	AB5	A	789	799	Right-handed alpha
Helix 15	AB6	A	821	850	Right-handed alpha
Helix 16	AB7	B	461	474	Right-handed alpha
Helix 17	AB8	B	500	507	Right-handed alpha
Helix 18	AB9	B	520	525	Right-handed alpha
Helix 19	AC1	B	560	584	Right-handed alpha
Helix 20	AC2	B	607	620	Right-handed alpha
Helix 21	AC3	B	630	659	Right-handed alpha
Helix 22	AC4	B	671	677	Right-handed alpha
Helix 23	AC5	B	688	696	Right-handed alpha
Helix 24	AC6	B	699	712	Right-handed alpha
Helix 25	AC7	B	720	730	Right-handed alpha
Helix 26	AC8	B	739	746	Right-handed alpha
Helix 27	AC9	B	774	789	Right-handed alpha
Helix 28	AD1	B	789	799	Right-handed alpha
Helix 29	AD2	B	822	850	Right-handed alpha
Helix 30	AD3	C	461	473	Right-handed alpha
Helix 31	AD4	C	499	507	Right-handed alpha
Helix 32	AD5	C	520	525	Right-handed alpha
Helix 33	AD6	C	553	557	Right-handed 310
Helix 34	AD7	C	560	585	Right-handed alpha
Helix 35	AD8	C	607	620	Right-handed alpha
Helix 36	AD9	C	630	665	Right-handed alpha
Helix 37	AE1	C	671	677	Right-handed alpha
Helix 38	AE2	C	688	696	Right-handed alpha
Helix 39	AE3	C	699	712	Right-handed alpha
Helix 40	AE4	C	720	731	Right-handed alpha
Helix 41	AE5	C	739	749	Right-handed alpha
Helix 42	AE6	C	774	788	Right-handed alpha
Helix 43	AE7	C	789	799	Right-handed alpha
Helix 44	AE8	C	821	850	Right-handed alpha
Helix 45	AE9	D	461	474	Right-handed alpha
Helix 46	AF1	D	500	507	Right-handed alpha
Helix 47	AF2	D	520	525	Right-handed alpha
Helix 48	AF3	D	560	584	Right-handed alpha
Helix 49	AF4	D	607	620	Right-handed alpha
Helix 50	AF5	D	630	659	Right-handed alpha
Helix 51	AF6	D	671	677	Right-handed alpha
Helix 52	AF7	D	688	696	Right-handed alpha
Helix 53	AF8	D	699	712	Right-handed alpha
Helix 54	AF9	D	720	730	Right-handed alpha
Helix 55	AG1	D	739	746	Right-handed alpha
Helix 56	AG2	D	774	789	Right-handed alpha
Helix 57	AG3	D	789	799	Right-handed alpha
Helix 58	AG4	D	822	850	Right-handed alpha

There are 20 sheets in PDB entry 8FWW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	437	first strand
Strand 2	A	478	482	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	527	529	first strand
Strand 2	A	767	769	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	536	first strand
Strand 2	A	762	764	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	738	first strand
Strand 2	A	538	543	anti-parallel
Strand 3	A	752	755	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	435	first strand
Strand 2	B	477	480	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	528	529	first strand
Strand 2	B	767	768	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	536	first strand
Strand 2	B	762	764	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	738	first strand
Strand 2	B	538	543	anti-parallel
Strand 3	B	752	754	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	684	685	first strand
Strand 2	B	717	718	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	437	first strand
Strand 2	C	478	482	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	527	529	first strand
Strand 2	C	767	769	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	536	first strand
Strand 2	C	762	764	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	736	738	first strand
Strand 2	C	538	543	anti-parallel
Strand 3	C	752	755	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	432	435	first strand
Strand 2	D	477	480	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	459	460	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	528	529	first strand
Strand 2	D	767	768	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	534	536	first strand
Strand 2	D	762	764	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	735	738	first strand
Strand 2	D	538	543	anti-parallel
Strand 3	D	752	754	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	684	685	first strand
Strand 2	D	717	718	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FWW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FWW