Analysis of interatomic Contacts of Structural Units in PDB entry:
8FX4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FX4 entry

There are 4 chains in PDB entry 8FX4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 11	ILE 690
B	VAL 12	ILE 690
C	VAL 2	GLY 266
D	THR 527	GLN 732

There are 61 helices in PDB entry 8FX4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	31	Right-handed alpha
Helix 2	AA2	A	37	61	Right-handed alpha
Helix 3	AA3	A	62	67	Right-handed 310
Helix 4	AA4	A	94	101	Right-handed alpha
Helix 5	AA5	A	108	117	Right-handed alpha
Helix 6	AA6	A	132	138	Right-handed 310
Helix 7	AA7	A	188	193	Right-handed 310
Helix 8	AA8	A	194	203	Right-handed alpha
Helix 9	AA9	A	297	309	Right-handed alpha
Helix 10	AB1	A	400	420	Right-handed alpha
Helix 11	AB2	A	423	444	Right-handed alpha
Helix 12	AB3	A	447	452	Right-handed alpha
Helix 13	AB4	A	469	475	Right-handed alpha
Helix 14	AB5	A	490	496	Right-handed alpha
Helix 15	AB6	A	500	507	Right-handed alpha
Helix 16	AB7	A	515	525	Right-handed alpha
Helix 17	AB8	A	546	570	Right-handed alpha
Helix 18	AB9	A	599	607	Right-handed alpha
Helix 19	AC1	A	615	621	Right-handed alpha
Helix 20	AC2	A	632	645	Right-handed alpha
Helix 21	AC3	A	649	667	Right-handed alpha
Helix 22	AC4	A	672	688	Right-handed alpha
Helix 23	AC5	B	21	31	Right-handed alpha
Helix 24	AC6	B	38	61	Right-handed alpha
Helix 25	AC7	B	62	66	Right-handed 310
Helix 26	AC8	B	94	101	Right-handed alpha
Helix 27	AC9	B	108	117	Right-handed alpha
Helix 28	AD1	B	132	140	Right-handed 310
Helix 29	AD2	B	189	193	Right-handed 310
Helix 30	AD3	B	194	206	Right-handed alpha
Helix 31	AD4	B	297	310	Right-handed alpha
Helix 32	AD5	B	371	375	Right-handed 310
Helix 33	AD6	B	398	419	Right-handed alpha
Helix 34	AD7	B	422	444	Right-handed alpha
Helix 35	AD8	B	447	452	Right-handed alpha
Helix 36	AD9	B	469	474	Right-handed alpha
Helix 37	AE1	B	490	496	Right-handed alpha
Helix 38	AE2	B	501	506	Right-handed alpha
Helix 39	AE3	B	517	525	Right-handed alpha
Helix 40	AE4	B	546	558	Right-handed alpha
Helix 41	AE5	B	560	572	Right-handed alpha
Helix 42	AE6	B	599	609	Right-handed alpha
Helix 43	AE7	B	632	645	Right-handed alpha
Helix 44	AE8	B	648	665	Right-handed alpha
Helix 45	AE9	B	672	689	Right-handed alpha
Helix 46	AF1	C	24	58	Right-handed alpha
Helix 47	AF2	C	90	113	Right-handed alpha
Helix 48	AF3	C	143	160	Right-handed alpha
Helix 49	AF4	C	179	183	Right-handed alpha
Helix 50	AF5	C	184	199	Right-handed alpha
Helix 51	AF6	C	207	228	Right-handed alpha
Helix 52	AF7	C	230	234	Right-handed 310
Helix 53	AF8	C	235	243	Right-handed alpha
Helix 54	AF9	C	250	266	Right-handed alpha
Helix 55	AG1	D	547	551	Right-handed 310
Helix 56	AG2	D	564	582	Right-handed alpha
Helix 57	AG3	D	625	631	Right-handed alpha
Helix 58	AG4	D	635	653	Right-handed alpha
Helix 59	AG5	D	664	674	Right-handed alpha
Helix 60	AG6	D	694	704	Right-handed alpha
Helix 61	AG7	D	714	729	Right-handed alpha

There are 14 sheets in PDB entry 8FX4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	15	first strand
Strand 2	B	165	169	anti-parallel
Strand 3	B	152	159	anti-parallel
Strand 4	B	143	149	anti-parallel
Strand 5	B	178	184	anti-parallel
Strand 6	B	83	88	anti-parallel
Strand 7	B	73	78	anti-parallel
Strand 8	B	213	215	parallel
Strand 9	B	280	283	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	19	first strand
Strand 2	B	104	105	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	78	first strand
Strand 2	A	83	88	anti-parallel
Strand 3	A	179	185	anti-parallel
Strand 4	A	140	147	anti-parallel
Strand 5	A	155	159	anti-parallel
Strand 6	A	165	168	anti-parallel
Strand 7	B	13	15	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	105	first strand
Strand 2	B	18	19	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	323	first strand
Strand 2	A	329	335	anti-parallel
Strand 3	A	378	383	anti-parallel
Strand 4	A	353	357	parallel
Strand 5	A	360	364	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	457	first strand
Strand 2	A	467	468	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	483	485	first strand
Strand 2	A	531	535	parallel
Strand 3	A	527	528	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	578	579	first strand
Strand 2	A	624	628	parallel
Strand 3	A	589	593	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	363	first strand
Strand 2	B	353	357	anti-parallel
Strand 3	B	378	383	parallel
Strand 4	B	329	335	anti-parallel
Strand 5	B	317	323	anti-parallel
Strand 6	C	123	129	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	456	457	first strand
Strand 2	B	467	468	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	483	first strand
Strand 2	B	531	533	parallel
Strand 3	B	527	528	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	486	487	first strand
Strand 2	B	512	513	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	577	580	first strand
Strand 2	B	624	628	parallel
Strand 3	B	589	593	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	597	599	first strand
Strand 2	D	605	607	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FX4

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FX4