Analysis of interatomic Contacts of Structural Units in PDB entry:
8FXU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FXU entry

There is 1 chain in PDB entry 8FXU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8FXU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 30Right-handed alpha
Helix 2
AA2
A
43 57Right-handed alpha
Helix 3
AA3
A
68 70Right-handed 310
Helix 4
AA4
A
71 83Right-handed alpha
Helix 5
AA5
A
94 99Right-handed alpha
Helix 6
AA6
A
110 129Right-handed alpha
Helix 7
AA7
A
130 133Right-handed 310
Helix 8
AA8
A
151 168Right-handed alpha
Helix 9
AA9
A
183 199Right-handed alpha
Helix 10
AB1
A
200 202Right-handed 310
Helix 11
AB2
A
209 223Right-handed alpha
Helix 12
AB3
A
240 249Right-handed alpha
Helix 13
AB4
A
259 276Right-handed alpha
Helix 14
AB5
A
281 286Right-handed alpha
Helix 15
AB6
A
305 311Right-handed 310
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There are 3 sheets in PDB entry 8FXU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
5 10parallel
Strand 3
A
61 64parallel
Strand 4
A
86 89parallel
Strand 5
A
104 108parallel
Strand 6
A
294 296parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 179first strand
Strand 2
A
139 146parallel
Strand 3
A
204 207parallel
Strand 4
A
234 235parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 257first strand
Strand 2
A
300 303anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il