Analysis of interatomic Contacts of Structural Units in PDB entry:
8FY3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FY3 entry

There are 3 chains in PDB entry 8FY3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6CYS 624
B
 ASP 25GLN 692
C
 ARG 281VAL 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 8FY3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 19Right-handed alpha
Helix 2
AA2
A
24 40Right-handed alpha
Helix 3
AA3
A
42 55Right-handed alpha
Helix 4
AA4
A
68 82Right-handed alpha
Helix 5
AA5
A
86 97Right-handed alpha
Helix 6
AA6
A
110 119Right-handed alpha
Helix 7
AA7
A
123 134Right-handed alpha
Helix 8
AA8
A
138 163Right-handed alpha
Helix 9
AA9
A
177 190Right-handed alpha
Helix 10
AB1
A
199 214Right-handed alpha
Helix 11
AB2
A
223 228Right-handed alpha
Helix 12
AB3
A
254 263Right-handed alpha
Helix 13
AB4
A
269 281Right-handed alpha
Helix 14
AB5
A
286 300Right-handed alpha
Helix 15
AB6
A
337 349Right-handed alpha
Helix 16
AB7
A
353 360Right-handed alpha
Helix 17
AB8
A
370 386Right-handed alpha
Helix 18
AB9
A
392 397Right-handed alpha
Helix 19
AC1
A
401 414Right-handed alpha
Helix 20
AC2
A
442 448Right-handed alpha
Helix 21
AC3
A
450 464Right-handed alpha
Helix 22
AC4
A
466 479Right-handed alpha
Helix 23
AC5
A
482 490Right-handed alpha
Helix 24
AC6
A
496 511Right-handed alpha
Helix 25
AC7
A
516 526Right-handed alpha
Helix 26
AC8
A
531 542Right-handed alpha
Helix 27
AC9
A
543 545Right-handed 310
Helix 28
AD1
A
557 567Right-handed alpha
Helix 29
AD2
A
579 592Right-handed alpha
Helix 30
AD3
A
596 608Right-handed alpha
Helix 31
AD4
A
609 614Right-handed 310
Helix 32
AD5
B
26 39Right-handed alpha
Helix 33
AD6
B
45 57Right-handed alpha
Helix 34
AD7
B
60 75Right-handed alpha
Helix 35
AD8
B
79 96Right-handed alpha
Helix 36
AD9
B
109 123Right-handed alpha
Helix 37
AE1
B
125 138Right-handed alpha
Helix 38
AE2
B
144 162Right-handed alpha
Helix 39
AE3
B
164 181Right-handed alpha
Helix 40
AE4
B
208 230Right-handed alpha
Helix 41
AE5
B
231 240Right-handed alpha
Helix 42
AE6
B
249 264Right-handed alpha
Helix 43
AE7
B
265 276Right-handed alpha
Helix 44
AE8
B
283 288Right-handed alpha
Helix 45
AE9
B
290 306Right-handed alpha
Helix 46
AF1
B
308 331Right-handed alpha
Helix 47
AF2
B
346 351Right-handed 310
Helix 48
AF3
B
353 369Right-handed alpha
Helix 49
AF4
B
370 382Right-handed alpha
Helix 50
AF5
B
388 403Right-handed alpha
Helix 51
AF6
B
457 472Right-handed alpha
Helix 52
AF7
B
524 547Right-handed alpha
Helix 53
AF8
B
548 561Right-handed alpha
Helix 54
AF9
B
566 584Right-handed alpha
Helix 55
AG1
B
586 594Right-handed alpha
Helix 56
AG2
B
595 599Right-handed 310
Helix 57
AG3
B
637 656Right-handed alpha
Helix 58
AG4
B
658 672Right-handed alpha
Helix 59
AG5
B
679 692Right-handed alpha
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There are no sheets in PDB entry 8FY3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il