Analysis of interatomic Contacts of Structural Units in PDB entry:
8FY4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FY4 entry

There are 3 chains in PDB entry 8FY4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 241
B
 ASP 24ASN 706
C
 SER 27LYS 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8FY4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 19Right-handed alpha
Helix 2
AA2
A
24 54Right-handed alpha
Helix 3
AA3
A
67 82Right-handed alpha
Helix 4
AA4
A
86 97Right-handed alpha
Helix 5
AA5
A
110 120Right-handed alpha
Helix 6
AA6
A
122 134Right-handed alpha
Helix 7
AA7
A
138 162Right-handed alpha
Helix 8
AA8
A
177 190Right-handed alpha
Helix 9
AA9
A
199 214Right-handed alpha
Helix 10
AB1
A
223 228Right-handed alpha
Helix 11
AB2
A
235 240Right-handed 310
Helix 12
AB3
B
25 40Right-handed alpha
Helix 13
AB4
B
41 56Right-handed alpha
Helix 14
AB5
B
59 74Right-handed alpha
Helix 15
AB6
B
78 93Right-handed alpha
Helix 16
AB7
B
108 122Right-handed alpha
Helix 17
AB8
B
124 138Right-handed alpha
Helix 18
AB9
B
143 161Right-handed alpha
Helix 19
AC1
B
163 180Right-handed alpha
Helix 20
AC2
B
205 230Right-handed alpha
Helix 21
AC3
B
231 243Right-handed alpha
Helix 22
AC4
B
249 264Right-handed alpha
Helix 23
AC5
B
265 276Right-handed alpha
Helix 24
AC6
B
290 306Right-handed alpha
Helix 25
AC7
B
308 329Right-handed alpha
Helix 26
AC8
B
336 340Right-handed 310
Helix 27
AC9
B
345 351Right-handed 310
Helix 28
AD1
B
353 369Right-handed alpha
Helix 29
AD2
B
370 382Right-handed alpha
Helix 30
AD3
B
388 403Right-handed alpha
Helix 31
AD4
B
457 472Right-handed alpha
Helix 32
AD5
B
524 547Right-handed alpha
Helix 33
AD6
B
548 561Right-handed alpha
Helix 34
AD7
B
566 584Right-handed alpha
Helix 35
AD8
B
586 594Right-handed alpha
Helix 36
AD9
B
595 599Right-handed 310
Helix 37
AE1
B
637 656Right-handed alpha
Helix 38
AE2
B
658 673Right-handed alpha
Helix 39
AE3
B
679 693Right-handed alpha
Helix 40
AE4
B
695 706Right-handed alpha
Helix 41
AE5
C
29 40Right-handed alpha
Helix 42
AE6
C
42 47Right-handed 310
Helix 43
AE7
C
48 60Right-handed alpha
Helix 44
AE8
C
64 78Right-handed alpha
Helix 45
AE9
C
84 98Right-handed alpha
Helix 46
AF1
C
103 107Right-handed 310
Helix 47
AF2
C
109 117Right-handed alpha
Helix 48
AF3
C
141 150Right-handed alpha
Helix 49
AF4
C
163 170Right-handed alpha
Helix 50
AF5
C
181 195Right-handed alpha
Helix 51
AF6
C
196 201Right-handed alpha
Helix 52
AF7
C
224 233Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8FY4.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 204first strand
Strand 2
C
242 243anti-parallel
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