Analysis of interatomic Contacts of Structural Units in PDB entry:
8FYH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FYH entry

There are 6 chains in PDB entry 8FYH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLN 80	GLU 689
C	SER 75	ARG 441
D	ASP 3	ASN 410
A	GLU 22	VAL 742
E	PRO 139	LEU 169
F	SER 182	ILE 211

There are 84 helices in PDB entry 8FYH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	80	105	Right-handed alpha
Helix 2	AA2	B	111	119	Right-handed 310
Helix 3	AA3	B	131	133	Right-handed 310
Helix 4	AA4	B	134	143	Right-handed alpha
Helix 5	AA5	B	459	470	Right-handed alpha
Helix 6	AA6	B	502	507	Right-handed 310
Helix 7	AA7	B	539	544	Right-handed 310
Helix 8	AA8	B	575	579	Right-handed 310
Helix 9	AA9	B	589	602	Right-handed alpha
Helix 10	AB1	B	607	625	Right-handed alpha
Helix 11	AB2	B	628	643	Right-handed alpha
Helix 12	AB3	B	643	651	Right-handed alpha
Helix 13	AB4	B	652	666	Right-handed alpha
Helix 14	AB5	B	670	689	Right-handed alpha
Helix 15	AB6	C	127	131	Right-handed 310
Helix 16	AB7	C	267	279	Right-handed alpha
Helix 17	AB8	D	4	27	Right-handed alpha
Helix 18	AB9	D	348	350	Right-handed 310
Helix 19	AC1	D	355	362	Right-handed alpha
Helix 20	AC2	D	405	410	Right-handed alpha
Helix 21	AC3	A	23	61	Right-handed alpha
Helix 22	AC4	A	168	178	Right-handed alpha
Helix 23	AC5	A	223	231	Right-handed alpha
Helix 24	AC6	A	239	250	Right-handed alpha
Helix 25	AC7	A	273	278	Right-handed alpha
Helix 26	AC8	A	278	284	Right-handed alpha
Helix 27	AC9	A	335	345	Right-handed alpha
Helix 28	AD1	A	438	453	Right-handed alpha
Helix 29	AD2	A	455	463	Right-handed alpha
Helix 30	AD3	A	467	479	Right-handed alpha
Helix 31	AD4	A	539	544	Right-handed alpha
Helix 32	AD5	A	576	581	Right-handed alpha
Helix 33	AD6	A	609	614	Right-handed alpha
Helix 34	AD7	A	653	664	Right-handed alpha
Helix 35	AD8	A	687	691	Right-handed 310
Helix 36	AD9	A	730	734	Right-handed 310
Helix 37	AE1	A	737	742	Right-handed alpha
Helix 38	AE2	E	142	149	Right-handed alpha
Helix 39	AE3	E	159	164	Right-handed alpha
Helix 40	AE4	F	192	210	Right-handed alpha
Helix 41	AE5	F	255	262	Right-handed alpha
Helix 42	AE6	F	270	272	Right-handed 310
Helix 43	AE7	F	276	281	Right-handed 310
Helix 44	AE8	H	81	105	Right-handed alpha
Helix 45	AE9	H	111	119	Right-handed 310
Helix 46	AF1	H	134	143	Right-handed alpha
Helix 47	AF2	H	459	470	Right-handed alpha
Helix 48	AF3	H	502	508	Right-handed 310
Helix 49	AF4	H	539	544	Right-handed 310
Helix 50	AF5	H	589	602	Right-handed alpha
Helix 51	AF6	H	607	625	Right-handed alpha
Helix 52	AF7	H	628	643	Right-handed alpha
Helix 53	AF8	H	643	651	Right-handed alpha
Helix 54	AF9	H	652	666	Right-handed alpha
Helix 55	AG1	H	670	689	Right-handed alpha
Helix 56	AG2	I	127	131	Right-handed 310
Helix 57	AG3	I	267	279	Right-handed alpha
Helix 58	AG4	J	4	27	Right-handed alpha
Helix 59	AG5	J	348	350	Right-handed 310
Helix 60	AG6	J	355	362	Right-handed alpha
Helix 61	AG7	J	406	409	Right-handed 310
Helix 62	AG8	G	23	61	Right-handed alpha
Helix 63	AG9	G	168	178	Right-handed alpha
Helix 64	AH1	G	223	231	Right-handed alpha
Helix 65	AH2	G	239	250	Right-handed alpha
Helix 66	AH3	G	273	278	Right-handed alpha
Helix 67	AH4	G	278	284	Right-handed alpha
Helix 68	AH5	G	335	345	Right-handed alpha
Helix 69	AH6	G	438	453	Right-handed alpha
Helix 70	AH7	G	455	463	Right-handed alpha
Helix 71	AH8	G	467	479	Right-handed alpha
Helix 72	AH9	G	539	544	Right-handed alpha
Helix 73	AI1	G	576	581	Right-handed alpha
Helix 74	AI2	G	609	614	Right-handed alpha
Helix 75	AI3	G	652	664	Right-handed alpha
Helix 76	AI4	G	688	691	Right-handed 310
Helix 77	AI5	G	730	734	Right-handed 310
Helix 78	AI6	G	737	742	Right-handed alpha
Helix 79	AI7	K	142	151	Right-handed alpha
Helix 80	AI8	K	159	164	Right-handed alpha
Helix 81	AI9	L	192	209	Right-handed alpha
Helix 82	AJ1	L	255	262	Right-handed alpha
Helix 83	AJ2	L	270	272	Right-handed 310
Helix 84	AJ3	L	276	281	Right-handed 310

There are 46 sheets in PDB entry 8FYH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	164	first strand
Strand 2	B	354	361	anti-parallel
Strand 3	B	313	318	anti-parallel
Strand 4	F	219	231	anti-parallel
Strand 5	F	239	243	anti-parallel
Strand 6	F	252	254	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	233	first strand
Strand 2	B	157	160	anti-parallel
Strand 3	B	354	361	anti-parallel
Strand 4	B	313	318	anti-parallel
Strand 5	F	219	231	anti-parallel
Strand 6	F	264	268	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	206	first strand
Strand 2	B	185	192	anti-parallel
Strand 3	B	245	253	anti-parallel
Strand 4	B	297	300	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	438	441	first strand
Strand 2	B	428	434	anti-parallel
Strand 3	B	485	491	parallel
Strand 4	B	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	557	560	first strand
Strand 2	B	525	530	anti-parallel
Strand 3	D	32	39	anti-parallel
Strand 4	D	398	404	anti-parallel
Strand 5	D	389	394	anti-parallel
Strand 6	D	377	382	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	87	first strand
Strand 2	C	434	439	anti-parallel
Strand 3	C	424	428	anti-parallel
Strand 4	C	415	418	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	101	first strand
Strand 2	C	111	117	anti-parallel
Strand 3	C	120	126	anti-parallel
Strand 4	C	133	139	anti-parallel
Strand 5	A	99	100	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	154	first strand
Strand 2	C	161	166	anti-parallel
Strand 3	C	172	176	anti-parallel
Strand 4	C	181	186	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	198	first strand
Strand 2	C	205	210	anti-parallel
Strand 3	C	215	219	anti-parallel
Strand 4	C	224	228	anti-parallel
Strand 5	C	292	293	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	244	first strand
Strand 2	C	250	254	anti-parallel
Strand 3	C	260	264	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	315	first strand
Strand 2	C	318	323	anti-parallel
Strand 3	C	327	333	anti-parallel
Strand 4	C	350	357	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	369	370	first strand
Strand 2	C	376	379	anti-parallel
Strand 3	C	386	390	anti-parallel
Strand 4	C	402	404	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	54	first strand
Strand 2	D	62	69	anti-parallel
Strand 3	D	77	86	anti-parallel
Strand 4	D	117	123	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	143	first strand
Strand 2	D	148	153	anti-parallel
Strand 3	D	172	174	anti-parallel
Strand 4	D	217	218	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	185	first strand
Strand 2	D	193	195	anti-parallel
Strand 3	D	202	205	anti-parallel
Strand 4	D	221	223	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	235	first strand
Strand 2	D	242	247	anti-parallel
Strand 3	D	253	256	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	280	281	first strand
Strand 2	D	288	292	anti-parallel
Strand 3	D	298	302	anti-parallel
Strand 4	D	312	313	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	320	325	first strand
Strand 2	D	332	337	anti-parallel
Strand 3	D	342	346	anti-parallel
Strand 4	D	366	370	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	85	first strand
Strand 2	A	94	97	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	685	686	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	121	first strand
Strand 2	A	649	652	parallel
Strand 3	A	678	681	anti-parallel
Strand 4	A	671	673	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	619	623	first strand
Strand 2	A	629	633	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	642	645	first strand
Strand 2	A	710	717	anti-parallel
Strand 3	A	700	707	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	163	164	first strand
Strand 2	H	354	361	anti-parallel
Strand 3	H	313	318	anti-parallel
Strand 4	L	219	231	anti-parallel
Strand 5	L	239	243	anti-parallel
Strand 6	L	252	254	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	232	233	first strand
Strand 2	H	157	160	anti-parallel
Strand 3	H	354	361	anti-parallel
Strand 4	H	313	318	anti-parallel
Strand 5	L	219	231	anti-parallel
Strand 6	L	264	268	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	203	206	first strand
Strand 2	H	185	192	anti-parallel
Strand 3	H	245	253	anti-parallel
Strand 4	H	297	300	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	438	443	first strand
Strand 2	H	428	434	anti-parallel
Strand 3	H	485	491	parallel
Strand 4	H	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	557	560	first strand
Strand 2	H	525	530	anti-parallel
Strand 3	J	32	39	anti-parallel
Strand 4	J	398	404	anti-parallel
Strand 5	J	389	394	anti-parallel
Strand 6	J	377	382	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	82	87	first strand
Strand 2	I	434	439	anti-parallel
Strand 3	I	424	428	anti-parallel
Strand 4	I	415	418	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	96	101	first strand
Strand 2	I	111	117	anti-parallel
Strand 3	I	120	126	anti-parallel
Strand 4	I	133	139	anti-parallel
Strand 5	G	99	100	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	149	154	first strand
Strand 2	I	161	166	anti-parallel
Strand 3	I	172	176	anti-parallel
Strand 4	I	181	186	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	193	198	first strand
Strand 2	I	205	210	anti-parallel
Strand 3	I	215	219	anti-parallel
Strand 4	I	224	228	anti-parallel
Strand 5	I	292	293	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	241	244	first strand
Strand 2	I	250	254	anti-parallel
Strand 3	I	260	264	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	309	315	first strand
Strand 2	I	318	323	anti-parallel
Strand 3	I	327	333	anti-parallel
Strand 4	I	350	357	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	369	370	first strand
Strand 2	I	376	379	anti-parallel
Strand 3	I	386	390	anti-parallel
Strand 4	I	402	404	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	49	54	first strand
Strand 2	J	62	68	anti-parallel
Strand 3	J	77	86	anti-parallel
Strand 4	J	117	123	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	139	143	first strand
Strand 2	J	148	153	anti-parallel
Strand 3	J	172	174	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	184	185	first strand
Strand 2	J	193	195	anti-parallel
Strand 3	J	202	205	anti-parallel
Strand 4	J	221	223	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	232	235	first strand
Strand 2	J	242	246	anti-parallel
Strand 3	J	252	256	anti-parallel
Strand 4	J	267	269	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	280	281	first strand
Strand 2	J	288	292	anti-parallel
Strand 3	J	298	302	anti-parallel
Strand 4	J	312	313	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	322	325	first strand
Strand 2	J	332	336	anti-parallel
Strand 3	J	342	346	anti-parallel
Strand 4	J	366	370	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	82	85	first strand
Strand 2	G	94	97	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	114	115	first strand
Strand 2	G	679	686	parallel
Strand 3	G	648	651	anti-parallel
Strand 4	G	120	121	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	114	115	first strand
Strand 2	G	679	686	parallel
Strand 3	G	671	673	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	619	623	first strand
Strand 2	G	629	633	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	642	645	first strand
Strand 2	G	710	717	anti-parallel
Strand 3	G	700	707	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FYH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FYH