Analysis of interatomic Contacts of Structural Units in PDB entry:
8FZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FZV entry

There are 3 chains in PDB entry 8FZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ILE 250
B
 GLY 1ILE 253
C
 HIS 8ALA 79
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8FZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
17 32Right-handed alpha
Helix 3
AA3
A
38 42Right-handed 310
Helix 4
AA4
A
45 50Right-handed alpha
Helix 5
AA5
A
53 61Right-handed alpha
Helix 6
AA6
A
65 82Right-handed alpha
Helix 7
AA7
A
95 97Right-handed 310
Helix 8
AA8
A
98 111Right-handed alpha
Helix 9
AA9
A
138 151Right-handed alpha
Helix 10
AB1
A
159 175Right-handed alpha
Helix 11
AB2
A
194 209Right-handed alpha
Helix 12
AB3
A
222 230Right-handed alpha
Helix 13
AB4
A
243 250Right-handed alpha
Helix 14
AB5
B
12 16Right-handed 310
Helix 15
AB6
B
17 32Right-handed alpha
Helix 16
AB7
B
45 50Right-handed alpha
Helix 17
AB8
B
53 61Right-handed alpha
Helix 18
AB9
B
64 80Right-handed alpha
Helix 19
AC1
B
93 97Right-handed 310
Helix 20
AC2
B
98 113Right-handed alpha
Helix 21
AC3
B
138 152Right-handed alpha
Helix 22
AC4
B
159 175Right-handed alpha
Helix 23
AC5
B
194 209Right-handed alpha
Helix 24
AC6
B
222 230Right-handed alpha
Helix 25
AC7
B
244 253Right-handed alpha
Helix 26
AC8
C
12 16Right-handed 310
Helix 27
AC9
C
17 32Right-handed alpha
Helix 28
AD1
C
38 43Right-handed 310
Helix 29
AD2
C
45 52Right-handed alpha
Helix 30
AD3
C
53 61Right-handed alpha
Helix 31
AD4
C
64 79Right-handed alpha
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There are 2 sheets in PDB entry 8FZV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 136first strand
Strand 2
A
118 125anti-parallel
Strand 3
A
83 90parallel
Strand 4
A
181 187parallel
Strand 5
A
212 217parallel
Strand 6
A
236 237parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 136first strand
Strand 2
B
120 123anti-parallel
Strand 3
B
84 88parallel
Strand 4
B
181 187parallel
Strand 5
B
211 217parallel
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