Analysis of interatomic Contacts of Structural Units in PDB entry:
8FZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FZZ entry

There are 4 chains in PDB entry 8FZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 173ILE 360
B
 MSE 1LYS 196
C
 VAL 175ILE 360
D
 MSE 1LYS 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8FZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
200 218Right-handed alpha
Helix 2
AA2
A
220 233Right-handed alpha
Helix 3
AA3
A
242 262Right-handed alpha
Helix 4
AA4
A
267 280Right-handed alpha
Helix 5
AA5
A
321 336Right-handed alpha
Helix 6
AA6
A
341 346Right-handed alpha
Helix 7
AA7
A
354 358Right-handed 310
Helix 8
AA8
B
2 8Right-handed alpha
Helix 9
AA9
B
20 26Right-handed alpha
Helix 10
AB1
B
31 41Right-handed alpha
Helix 11
AB2
B
55 64Right-handed alpha
Helix 12
AB3
B
115 123Right-handed alpha
Helix 13
AB4
B
126 133Right-handed alpha
Helix 14
AB5
B
138 147Right-handed alpha
Helix 15
AB6
B
168 170Right-handed 310
Helix 16
AB7
B
177 188Right-handed alpha
Helix 17
AB8
C
192 196Right-handed 310
Helix 18
AB9
C
198 217Right-handed alpha
Helix 19
AC1
C
220 233Right-handed alpha
Helix 20
AC2
C
242 261Right-handed alpha
Helix 21
AC3
C
267 277Right-handed alpha
Helix 22
AC4
C
322 336Right-handed alpha
Helix 23
AC5
C
341 346Right-handed alpha
Helix 24
AC6
C
354 358Right-handed 310
Helix 25
AC7
D
2 8Right-handed alpha
Helix 26
AC8
D
19 26Right-handed alpha
Helix 27
AC9
D
31 41Right-handed alpha
Helix 28
AD1
D
55 64Right-handed alpha
Helix 29
AD2
D
115 122Right-handed alpha
Helix 30
AD3
D
126 133Right-handed alpha
Helix 31
AD4
D
138 147Right-handed alpha
Helix 32
AD5
D
168 170Right-handed 310
Helix 33
AD6
D
177 188Right-handed alpha
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There are 6 sheets in PDB entry 8FZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
352 353parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 16first strand
Strand 2
B
43 46anti-parallel
Strand 3
B
51 53anti-parallel
Strand 4
B
74 81anti-parallel
Strand 5
B
86 91anti-parallel
Strand 6
B
98 103anti-parallel
Strand 7
B
108 113anti-parallel
Strand 8
B
192 193parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 157first strand
Strand 2
B
172 176anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 184first strand
Strand 2
C
352 353parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
235 236first strand
Strand 2
D
192 194anti-parallel
Strand 3
D
108 112parallel
Strand 4
D
98 103anti-parallel
Strand 5
D
86 92anti-parallel
Strand 6
D
72 81anti-parallel
Strand 7
D
51 53anti-parallel
Strand 8
D
43 46anti-parallel
Strand 9
D
13 16anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
153 157first strand
Strand 2
D
172 176anti-parallel
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