Analysis of interatomic Contacts of Structural Units in PDB entry:
8G0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G0L entry

There are 3 chains in PDB entry 8G0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ASP 159
B
 ASP 9ILE 972
C
 MET 1MET 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8G0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 14Right-handed 310
Helix 2
AA2
A
15 20Right-handed alpha
Helix 3
AA3
A
28 39Right-handed alpha
Helix 4
AA4
A
81 84Right-handed 310
Helix 5
AA5
A
87 103Right-handed alpha
Helix 6
AA6
A
116 126Right-handed alpha
Helix 7
AA7
B
10 24Right-handed alpha
Helix 8
AA8
B
26 41Right-handed alpha
Helix 9
AA9
B
44 58Right-handed alpha
Helix 10
AB1
B
61 74Right-handed alpha
Helix 11
AB2
B
78 92Right-handed alpha
Helix 12
AB3
B
95 109Right-handed alpha
Helix 13
AB4
B
112 127Right-handed alpha
Helix 14
AB5
B
128 143Right-handed alpha
Helix 15
AB6
B
145 163Right-handed alpha
Helix 16
AB7
B
165 172Right-handed alpha
Helix 17
AB8
B
172 188Right-handed alpha
Helix 18
AB9
B
193 206Right-handed alpha
Helix 19
AC1
B
208 218Right-handed alpha
Helix 20
AC2
B
219 224Right-handed 310
Helix 21
AC3
B
229 243Right-handed alpha
Helix 22
AC4
B
244 259Right-handed alpha
Helix 23
AC5
B
262 280Right-handed alpha
Helix 24
AC6
B
298 316Right-handed alpha
Helix 25
AC7
B
321 338Right-handed alpha
Helix 26
AC8
B
347 359Right-handed alpha
Helix 27
AC9
B
364 373Right-handed alpha
Helix 28
AD1
B
374 376Right-handed 310
Helix 29
AD2
B
380 389Right-handed alpha
Helix 30
AD3
B
407 424Right-handed alpha
Helix 31
AD4
B
425 429Right-handed 310
Helix 32
AD5
B
431 450Right-handed alpha
Helix 33
AD6
B
464 483Right-handed alpha
Helix 34
AD7
B
484 502Right-handed alpha
Helix 35
AD8
B
506 520Right-handed alpha
Helix 36
AD9
B
522 533Right-handed alpha
Helix 37
AE1
B
535 543Right-handed alpha
Helix 38
AE2
B
543 551Right-handed alpha
Helix 39
AE3
B
552 554Right-handed 310
Helix 40
AE4
B
555 588Right-handed alpha
Helix 41
AE5
B
589 591Right-handed 310
Helix 42
AE6
B
592 605Right-handed alpha
Helix 43
AE7
B
606 624Right-handed alpha
Helix 44
AE8
B
632 639Right-handed alpha
Helix 45
AE9
B
648 652Right-handed 310
Helix 46
AF1
B
672 699Right-handed alpha
Helix 47
AF2
B
700 704Right-handed 310
Helix 48
AF3
B
723 746Right-handed alpha
Helix 49
AF4
B
760 768Right-handed alpha
Helix 50
AF5
B
768 790Right-handed alpha
Helix 51
AF6
B
795 819Right-handed alpha
Helix 52
AF7
B
834 870Right-handed alpha
Helix 53
AF8
B
885 917Right-handed alpha
Helix 54
AF9
B
932 966Right-handed alpha
Helix 55
AG1
B
967 971Right-handed 310
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There are 2 sheets in PDB entry 8G0L. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
53 62anti-parallel
Strand 4
A
71 79anti-parallel
Strand 5
A
108 113parallel
Strand 6
A
149 154anti-parallel
Strand 7
A
129 134anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
825 827first strand
Strand 2
B
830 832anti-parallel
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