Analysis of interatomic Contacts of Structural Units in PDB entry:
8G0O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8G0O entry

There are 2 chains in PDB entry 8G0O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 38	GLN 799
B	SER 38	ARG 798

There are 46 helices in PDB entry 8G0O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	52	Right-handed alpha
Helix 2	AA2	A	53	56	Right-handed 310
Helix 3	AA3	A	60	81	Right-handed alpha
Helix 4	AA4	A	101	119	Right-handed alpha
Helix 5	AA5	A	128	146	Right-handed alpha
Helix 6	AA6	A	156	162	Right-handed alpha
Helix 7	AA7	A	162	175	Right-handed alpha
Helix 8	AA8	A	180	195	Right-handed alpha
Helix 9	AA9	A	203	207	Right-handed 310
Helix 10	AB1	A	219	238	Right-handed alpha
Helix 11	AB2	A	239	250	Right-handed alpha
Helix 12	AB3	A	251	254	Right-handed 310
Helix 13	AB4	A	280	293	Right-handed alpha
Helix 14	AB5	A	304	319	Right-handed alpha
Helix 15	AB6	A	330	339	Right-handed 310
Helix 16	AB7	A	343	359	Right-handed alpha
Helix 17	AB8	A	360	362	Right-handed 310
Helix 18	AB9	A	363	381	Right-handed alpha
Helix 19	AC1	A	391	403	Right-handed alpha
Helix 20	AC2	A	475	480	Right-handed alpha
Helix 21	AC3	A	501	505	Right-handed 310
Helix 22	AC4	A	624	628	Right-handed alpha
Helix 23	AC5	A	665	674	Right-handed alpha
Helix 24	AC6	B	39	52	Right-handed alpha
Helix 25	AC7	B	53	56	Right-handed 310
Helix 26	AC8	B	60	80	Right-handed alpha
Helix 27	AC9	B	91	95	Right-handed 310
Helix 28	AD1	B	101	119	Right-handed alpha
Helix 29	AD2	B	128	146	Right-handed alpha
Helix 30	AD3	B	156	162	Right-handed alpha
Helix 31	AD4	B	162	175	Right-handed alpha
Helix 32	AD5	B	180	195	Right-handed alpha
Helix 33	AD6	B	203	207	Right-handed 310
Helix 34	AD7	B	219	238	Right-handed alpha
Helix 35	AD8	B	239	250	Right-handed alpha
Helix 36	AD9	B	251	255	Right-handed 310
Helix 37	AE1	B	280	297	Right-handed alpha
Helix 38	AE2	B	304	319	Right-handed alpha
Helix 39	AE3	B	330	339	Right-handed 310
Helix 40	AE4	B	343	360	Right-handed alpha
Helix 41	AE5	B	363	381	Right-handed alpha
Helix 42	AE6	B	391	403	Right-handed alpha
Helix 43	AE7	B	475	480	Right-handed alpha
Helix 44	AE8	B	501	505	Right-handed 310
Helix 45	AE9	B	623	628	Right-handed alpha
Helix 46	AF1	B	665	674	Right-handed alpha

There are 16 sheets in PDB entry 8G0O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	201	first strand
Strand 2	A	216	217	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	263	first strand
Strand 2	A	269	271	anti-parallel
Strand 3	A	275	276	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	324	first strand
Strand 2	A	327	328	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	416	first strand
Strand 2	A	421	425	anti-parallel
Strand 3	A	430	434	anti-parallel
Strand 4	A	460	464	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	491	first strand
Strand 2	A	562	571	anti-parallel
Strand 3	A	639	650	anti-parallel
Strand 4	A	612	623	anti-parallel
Strand 5	A	589	592	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	518	first strand
Strand 2	A	521	529	anti-parallel
Strand 3	A	536	543	anti-parallel
Strand 4	A	548	556	anti-parallel
Strand 5	A	656	662	anti-parallel
Strand 6	A	603	607	anti-parallel
Strand 7	A	596	599	anti-parallel
Strand 8	A	578	580	anti-parallel
Strand 9	A	583	585	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	686	first strand
Strand 2	A	690	696	anti-parallel
Strand 3	A	706	712	anti-parallel
Strand 4	A	727	734	anti-parallel
Strand 5	A	737	743	anti-parallel
Strand 6	A	792	797	anti-parallel
Strand 7	A	761	765	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	716	718	first strand
Strand 2	A	721	723	anti-parallel
Strand 3	A	751	757	anti-parallel
Strand 4	A	777	783	anti-parallel
Strand 5	A	769	773	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	201	first strand
Strand 2	B	216	217	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	263	first strand
Strand 2	B	269	271	anti-parallel
Strand 3	B	275	276	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	323	324	first strand
Strand 2	B	327	328	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	416	first strand
Strand 2	B	421	425	anti-parallel
Strand 3	B	430	434	anti-parallel
Strand 4	B	460	464	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	491	first strand
Strand 2	B	562	571	anti-parallel
Strand 3	B	640	650	anti-parallel
Strand 4	B	612	622	anti-parallel
Strand 5	B	589	592	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	518	first strand
Strand 2	B	521	529	anti-parallel
Strand 3	B	536	543	anti-parallel
Strand 4	B	548	556	anti-parallel
Strand 5	B	656	662	anti-parallel
Strand 6	B	603	607	anti-parallel
Strand 7	B	596	599	anti-parallel
Strand 8	B	578	580	anti-parallel
Strand 9	B	583	585	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	686	first strand
Strand 2	B	690	696	anti-parallel
Strand 3	B	706	712	anti-parallel
Strand 4	B	727	734	anti-parallel
Strand 5	B	737	743	anti-parallel
Strand 6	B	792	797	anti-parallel
Strand 7	B	761	765	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	716	718	first strand
Strand 2	B	721	723	anti-parallel
Strand 3	B	751	757	anti-parallel
Strand 4	B	777	783	anti-parallel
Strand 5	B	769	772	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8G0O

Analysis of interatomic Contacts of Structural Units in PDB entry:
8G0O