Analysis of interatomic Contacts of Structural Units in PDB entry:
8G1L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G1L entry

There is 1 chain in PDB entry 8G1L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 354THR 605
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 8G1L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
360 362Right-handed 310
Helix 2
AA2
A
441 449Right-handed alpha
Helix 3
AA3
A
473 479Right-handed alpha
Helix 4
AA4
A
508 512Right-handed alpha
Helix 5
AA5
A
560 564Right-handed alpha
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There are 4 sheets in PDB entry 8G1L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 358first strand
Strand 2
A
601 604anti-parallel
Strand 3
A
413 420anti-parallel
Strand 4
A
593 595anti-parallel
Strand 5
A
384 387anti-parallel
Strand 6
A
370 373anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 358first strand
Strand 2
A
601 604anti-parallel
Strand 3
A
413 420anti-parallel
Strand 4
A
534 541anti-parallel
Strand 5
A
546 551anti-parallel
Strand 6
A
554 559anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 368first strand
Strand 2
A
398 403anti-parallel
Strand 3
A
572 578anti-parallel
Strand 4
A
432 438anti-parallel
Strand 5
A
461 466anti-parallel
Strand 6
A
487 495anti-parallel
Strand 7
A
501 504anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 368first strand
Strand 2
A
398 403anti-parallel
Strand 3
A
572 578anti-parallel
Strand 4
A
432 438anti-parallel
Strand 5
A
461 466anti-parallel
Strand 6
A
487 495anti-parallel
Strand 7
A
513 515anti-parallel
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