Analysis of interatomic Contacts of Structural Units in PDB entry:
8G1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G1M entry

There is 1 chain in PDB entry 8G1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 164GLU 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 8G1M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
170 172Right-handed 310
Helix 2
AA2
A
250 258Right-handed alpha
Helix 3
AA3
A
282 288Right-handed alpha
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There are 4 sheets in PDB entry 8G1M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
404 415anti-parallel
Strand 3
A
193 197anti-parallel
Strand 4
A
180 184anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
404 415anti-parallel
Strand 3
A
222 229anti-parallel
Strand 4
A
345 352anti-parallel
Strand 5
A
357 362anti-parallel
Strand 6
A
365 370anti-parallel
Strand 7
A
315 316anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 178first strand
Strand 2
A
206 212anti-parallel
Strand 3
A
381 390anti-parallel
Strand 4
A
241 247anti-parallel
Strand 5
A
269 275anti-parallel
Strand 6
A
296 304anti-parallel
Strand 7
A
310 313anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
381 390anti-parallel
Strand 3
A
241 247anti-parallel
Strand 4
A
269 275anti-parallel
Strand 5
A
296 304anti-parallel
Strand 6
A
324 326anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il