Analysis of interatomic Contacts of Structural Units in PDB entry:
8G1S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8G1S entry

There are 8 chains in PDB entry 8G1S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	G 10	G 39
B	C 1	C 30
G	PHE 8	LEU 234
H	VAL 5	LEU 234
I	VAL 2	ASP 1341
J	GLU 16	ARG 1373
K	ALA 2	LEU 80
R	G 1	A 47

There are100 helices in PDB entry 8G1S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	86	Right-handed alpha
Helix 3	AA3	G	111	113	Right-handed 310
Helix 4	AA4	G	212	229	Right-handed alpha
Helix 5	AA5	G	230	232	Right-handed 310
Helix 6	AA6	H	35	50	Right-handed alpha
Helix 7	AA7	H	79	87	Right-handed alpha
Helix 8	AA8	H	113	115	Right-handed 310
Helix 9	AA9	H	212	227	Right-handed alpha
Helix 10	AB1	H	228	232	Right-handed 310
Helix 11	AB2	I	4	10	Right-handed alpha
Helix 12	AB3	I	28	39	Right-handed alpha
Helix 13	AB4	I	48	57	Right-handed alpha
Helix 14	AB5	I	81	89	Right-handed alpha
Helix 15	AB6	I	206	213	Right-handed alpha
Helix 16	AB7	I	216	225	Right-handed alpha
Helix 17	AB8	I	242	246	Right-handed 310
Helix 18	AB9	I	270	281	Right-handed alpha
Helix 19	AC1	I	288	294	Right-handed alpha
Helix 20	AC2	I	318	327	Right-handed alpha
Helix 21	AC3	I	345	354	Right-handed alpha
Helix 22	AC4	I	358	371	Right-handed alpha
Helix 23	AC5	I	377	389	Right-handed alpha
Helix 24	AC6	I	398	409	Right-handed alpha
Helix 25	AC7	I	421	437	Right-handed alpha
Helix 26	AC8	I	455	479	Right-handed alpha
Helix 27	AC9	I	495	507	Right-handed alpha
Helix 28	AD1	I	519	526	Right-handed alpha
Helix 29	AD2	I	544	549	Right-handed alpha
Helix 30	AD3	I	607	614	Right-handed alpha
Helix 31	AD4	I	662	667	Right-handed alpha
Helix 32	AD5	I	675	685	Right-handed alpha
Helix 33	AD6	I	704	712	Right-handed alpha
Helix 34	AD7	I	819	825	Right-handed alpha
Helix 35	AD8	I	858	865	Right-handed alpha
Helix 36	AD9	I	942	979	Right-handed alpha
Helix 37	AE1	I	985	990	Right-handed alpha
Helix 38	AE2	I	1006	1038	Right-handed alpha
Helix 39	AE3	I	1099	1103	Right-handed 310
Helix 40	AE4	I	1109	1134	Right-handed alpha
Helix 41	AE5	I	1137	1151	Right-handed alpha
Helix 42	AE6	I	1167	1177	Right-handed alpha
Helix 43	AE7	I	1191	1202	Right-handed alpha
Helix 44	AE8	I	1271	1280	Right-handed alpha
Helix 45	AE9	I	1283	1292	Right-handed alpha
Helix 46	AF1	I	1297	1309	Right-handed alpha
Helix 47	AF2	I	1320	1332	Right-handed alpha
Helix 48	AF3	J	28	33	Right-handed alpha
Helix 49	AF4	J	94	100	Right-handed 310
Helix 50	AF5	J	122	129	Right-handed alpha
Helix 51	AF6	J	131	140	Right-handed alpha
Helix 52	AF7	J	161	172	Right-handed alpha
Helix 53	AF8	J	181	192	Right-handed alpha
Helix 54	AF9	J	193	208	Right-handed alpha
Helix 55	AG1	J	210	229	Right-handed alpha
Helix 56	AG2	J	233	238	Right-handed 310
Helix 57	AG3	J	246	250	Right-handed 310
Helix 58	AG4	J	265	286	Right-handed alpha
Helix 59	AG5	J	288	309	Right-handed alpha
Helix 60	AG6	J	336	341	Right-handed alpha
Helix 61	AG7	J	370	377	Right-handed alpha
Helix 62	AG8	J	377	389	Right-handed alpha
Helix 63	AG9	J	393	403	Right-handed alpha
Helix 64	AH1	J	405	416	Right-handed alpha
Helix 65	AH2	J	430	434	Right-handed 310
Helix 66	AH3	J	453	458	Right-handed alpha
Helix 67	AH4	J	473	483	Right-handed alpha
Helix 68	AH5	J	485	489	Right-handed 310
Helix 69	AH6	J	504	514	Right-handed alpha
Helix 70	AH7	J	529	539	Right-handed alpha
Helix 71	AH8	J	574	580	Right-handed alpha
Helix 72	AH9	J	588	592	Right-handed 310
Helix 73	AI1	J	597	613	Right-handed alpha
Helix 74	AI2	J	614	636	Right-handed alpha
Helix 75	AI3	J	640	644	Right-handed 310
Helix 76	AI4	J	647	670	Right-handed alpha
Helix 77	AI5	J	674	702	Right-handed alpha
Helix 78	AI6	J	720	728	Right-handed alpha
Helix 79	AI7	J	733	742	Right-handed alpha
Helix 80	AI8	J	768	804	Right-handed alpha
Helix 81	AI9	J	834	839	Right-handed alpha
Helix 82	AJ1	J	865	875	Right-handed alpha
Helix 83	AJ2	J	884	888	Right-handed 310
Helix 84	AJ3	J	914	925	Right-handed alpha
Helix 85	AJ4	J	926	928	Right-handed 310
Helix 86	AJ5	J	1137	1146	Right-handed alpha
Helix 87	AJ6	J	1216	1225	Right-handed alpha
Helix 88	AJ7	J	1225	1244	Right-handed alpha
Helix 89	AJ8	J	1250	1261	Right-handed alpha
Helix 90	AJ9	J	1282	1293	Right-handed alpha
Helix 91	AK1	J	1308	1313	Right-handed alpha
Helix 92	AK2	J	1314	1316	Right-handed 310
Helix 93	AK3	J	1319	1326	Right-handed alpha
Helix 94	AK4	J	1327	1339	Right-handed alpha
Helix 95	AK5	J	1346	1354	Right-handed alpha
Helix 96	AK6	J	1362	1373	Right-handed alpha
Helix 97	AK7	K	6	11	Right-handed alpha
Helix 98	AK8	K	17	32	Right-handed alpha
Helix 99	AK9	K	45	56	Right-handed alpha
Helix 100	AL1	K	60	78	Right-handed alpha

There are 43 sheets in PDB entry 8G1S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	15	first strand
Strand 2	G	26	28	anti-parallel
Strand 3	G	201	203	anti-parallel
Strand 4	G	185	187	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	115	116	first strand
Strand 2	G	97	103	anti-parallel
Strand 3	G	141	147	anti-parallel
Strand 4	G	56	60	anti-parallel
Strand 5	G	170	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	91	first strand
Strand 2	G	122	123	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	109	first strand
Strand 2	G	132	133	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	180	182	first strand
Strand 2	G	206	207	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	16	first strand
Strand 2	H	23	27	anti-parallel
Strand 3	H	202	207	anti-parallel
Strand 4	H	180	185	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	31	32	first strand
Strand 2	H	198	200	anti-parallel
Strand 3	H	188	190	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	99	105	first strand
Strand 2	H	139	147	anti-parallel
Strand 3	H	55	61	anti-parallel
Strand 4	H	171	172	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	91	first strand
Strand 2	H	122	123	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	111	first strand
Strand 2	H	129	133	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	14	first strand
Strand 2	I	1182	1183	parallel
Strand 3	I	700	701	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	66	69	first strand
Strand 2	I	93	105	anti-parallel
Strand 3	I	73	75	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	66	69	first strand
Strand 2	I	93	105	anti-parallel
Strand 3	I	114	128	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	454	first strand
Strand 2	I	147	151	anti-parallel
Strand 3	I	530	531	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	158	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	188	anti-parallel
Strand 4	I	194	198	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	227	231	first strand
Strand 2	I	332	336	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	239	240	first strand
Strand 2	I	284	285	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	250	251	first strand
Strand 2	I	267	268	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	599	606	first strand
Strand 2	I	589	594	anti-parallel
Strand 3	I	652	654	anti-parallel
Strand 4	I	616	617	parallel
Strand 5	I	636	637	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	716	718	first strand
Strand 2	I	781	785	anti-parallel
Strand 3	I	768	769	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	748	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	727	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	757	758	first strand
Strand 2	I	764	765	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	789	790	first strand
Strand 2	I	793	794	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1096	1098	first strand
Strand 2	I	800	804	parallel
Strand 3	I	1225	1230	anti-parallel
Strand 4	I	1209	1210	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	838	first strand
Strand 2	I	1050	1058	anti-parallel
Strand 3	I	927	933	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1065	1066	first strand
Strand 2	I	1074	1075	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1244	1246	first strand
Strand 2	J	350	354	anti-parallel
Strand 3	J	465	469	anti-parallel
Strand 4	J	421	425	anti-parallel
Strand 5	J	436	442	anti-parallel
Strand 6	J	365	369	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1338	first strand
Strand 2	J	20	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	37	first strand
Strand 2	J	102	111	parallel
Strand 3	J	239	243	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	144	145	first strand
Strand 2	J	159	160	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	356	357	first strand
Strand 2	J	448	449	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	547	556	first strand
Strand 2	J	564	573	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	706	708	first strand
Strand 2	J	713	715	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	842	843	first strand
Strand 2	J	863	864	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	951	first strand
Strand 2	J	1016	1019	anti-parallel
Strand 3	J	1002	1003	anti-parallel
Strand 4	J	973	975	anti-parallel
Strand 5	J	965	967	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	991	997	first strand
Strand 2	J	980	985	anti-parallel
Strand 3	J	956	961	anti-parallel
Strand 4	J	1009	1011	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1034	1036	first strand
Strand 2	J	1079	1081	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1046	1047	first strand
Strand 2	J	1059	1061	anti-parallel
Strand 3	J	1105	1107	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1161	1162	first strand
Strand 2	J	1203	1204	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1268	anti-parallel
Strand 3	J	1301	1305	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8G1S

Analysis of interatomic Contacts of Structural Units in PDB entry:
8G1S