Analysis of interatomic Contacts of Structural Units in PDB entry:
8G27

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8G27 entry

There are 3 chains in PDB entry 8G27 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	GLU 157	THR 935
I	GLU 157	LYS 956
C	GLU 157	VAL 955

There are 82 helices in PDB entry 8G27. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	170	193	Right-handed alpha
Helix 2	AA2	D	199	222	Right-handed alpha
Helix 3	AA3	D	223	225	Right-handed 310
Helix 4	AA4	D	234	242	Right-handed alpha
Helix 5	AA5	D	266	278	Right-handed alpha
Helix 6	AA6	D	297	322	Right-handed alpha
Helix 7	AA7	D	327	333	Right-handed alpha
Helix 8	AA8	D	346	372	Right-handed alpha
Helix 9	AA9	D	437	451	Right-handed alpha
Helix 10	AB1	D	469	479	Right-handed alpha
Helix 11	AB2	D	509	515	Right-handed alpha
Helix 12	AB3	D	515	521	Right-handed alpha
Helix 13	AB4	D	537	542	Right-handed alpha
Helix 14	AB5	D	611	618	Right-handed alpha
Helix 15	AB6	D	621	628	Right-handed alpha
Helix 16	AB7	D	640	651	Right-handed alpha
Helix 17	AB8	D	674	685	Right-handed alpha
Helix 18	AB9	D	707	728	Right-handed alpha
Helix 19	AC1	D	743	756	Right-handed alpha
Helix 20	AC2	D	759	776	Right-handed alpha
Helix 21	AC3	D	787	811	Right-handed alpha
Helix 22	AC4	D	813	831	Right-handed alpha
Helix 23	AC5	D	831	843	Right-handed alpha
Helix 24	AC6	D	870	875	Right-handed alpha
Helix 25	AC7	D	875	897	Right-handed alpha
Helix 26	AC8	D	905	921	Right-handed alpha
Helix 27	AC9	D	921	930	Right-handed alpha
Helix 28	AD1	I	170	193	Right-handed alpha
Helix 29	AD2	I	199	222	Right-handed alpha
Helix 30	AD3	I	223	225	Right-handed 310
Helix 31	AD4	I	234	242	Right-handed alpha
Helix 32	AD5	I	266	278	Right-handed alpha
Helix 33	AD6	I	297	322	Right-handed alpha
Helix 34	AD7	I	327	333	Right-handed alpha
Helix 35	AD8	I	346	372	Right-handed alpha
Helix 36	AD9	I	436	451	Right-handed alpha
Helix 37	AE1	I	469	479	Right-handed alpha
Helix 38	AE2	I	482	486	Right-handed 310
Helix 39	AE3	I	509	515	Right-handed alpha
Helix 40	AE4	I	515	520	Right-handed alpha
Helix 41	AE5	I	537	542	Right-handed alpha
Helix 42	AE6	I	611	618	Right-handed alpha
Helix 43	AE7	I	621	628	Right-handed alpha
Helix 44	AE8	I	640	651	Right-handed alpha
Helix 45	AE9	I	674	685	Right-handed alpha
Helix 46	AF1	I	707	728	Right-handed alpha
Helix 47	AF2	I	731	735	Right-handed 310
Helix 48	AF3	I	743	753	Right-handed alpha
Helix 49	AF4	I	755	758	Right-handed 310
Helix 50	AF5	I	759	776	Right-handed alpha
Helix 51	AF6	I	787	811	Right-handed alpha
Helix 52	AF7	I	813	846	Right-handed alpha
Helix 53	AF8	I	870	875	Right-handed alpha
Helix 54	AF9	I	875	899	Right-handed alpha
Helix 55	AG1	I	905	927	Right-handed alpha
Helix 56	AG2	I	928	930	Right-handed 310
Helix 57	AG3	I	936	956	Right-handed alpha
Helix 58	AG4	C	170	194	Right-handed alpha
Helix 59	AG5	C	199	222	Right-handed alpha
Helix 60	AG6	C	223	225	Right-handed 310
Helix 61	AG7	C	234	242	Right-handed alpha
Helix 62	AG8	C	270	279	Right-handed alpha
Helix 63	AG9	C	297	322	Right-handed alpha
Helix 64	AH1	C	327	332	Right-handed alpha
Helix 65	AH2	C	346	373	Right-handed alpha
Helix 66	AH3	C	436	451	Right-handed alpha
Helix 67	AH4	C	469	479	Right-handed alpha
Helix 68	AH5	C	509	521	Right-handed alpha
Helix 69	AH6	C	537	542	Right-handed alpha
Helix 70	AH7	C	611	619	Right-handed alpha
Helix 71	AH8	C	621	628	Right-handed alpha
Helix 72	AH9	C	640	652	Right-handed alpha
Helix 73	AI1	C	674	685	Right-handed alpha
Helix 74	AI2	C	707	728	Right-handed alpha
Helix 75	AI3	C	743	756	Right-handed alpha
Helix 76	AI4	C	759	777	Right-handed alpha
Helix 77	AI5	C	786	811	Right-handed alpha
Helix 78	AI6	C	813	846	Right-handed alpha
Helix 79	AI7	C	870	875	Right-handed alpha
Helix 80	AI8	C	875	900	Right-handed alpha
Helix 81	AI9	C	904	928	Right-handed alpha
Helix 82	AJ1	C	934	955	Right-handed alpha

There are 10 sheets in PDB entry 8G27. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	164	first strand
Strand 2	D	228	232	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	399	403	first strand
Strand 2	D	420	424	anti-parallel
Strand 3	D	287	293	parallel
Strand 4	D	253	259	parallel
Strand 5	D	455	458	parallel
Strand 6	D	533	536	anti-parallel
Strand 7	D	489	491	anti-parallel
Strand 8	D	691	692	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	495	496	first strand
Strand 2	D	701	702	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	160	164	first strand
Strand 2	I	228	232	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	258	259	first strand
Strand 2	I	288	293	parallel
Strand 3	I	420	424	parallel
Strand 4	I	399	403	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	258	259	first strand
Strand 2	I	288	293	parallel
Strand 3	I	254	256	parallel
Strand 4	I	455	458	parallel
Strand 5	I	533	536	anti-parallel
Strand 6	I	489	491	anti-parallel
Strand 7	I	691	692	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	464	465	first strand
Strand 2	I	700	702	anti-parallel
Strand 3	I	495	496	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	164	first strand
Strand 2	C	228	232	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	399	403	first strand
Strand 2	C	419	424	anti-parallel
Strand 3	C	288	293	parallel
Strand 4	C	254	259	parallel
Strand 5	C	455	458	parallel
Strand 6	C	533	536	anti-parallel
Strand 7	C	489	491	anti-parallel
Strand 8	C	691	692	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	464	465	first strand
Strand 2	C	700	702	anti-parallel
Strand 3	C	495	496	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8G27

Analysis of interatomic Contacts of Structural Units in PDB entry:
8G27