Analysis of interatomic Contacts of Structural Units in PDB entry:
8G28


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G28 entry

There are 2 chains in PDB entry 8G28 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 238THR 345
B
 ASP 241LYS 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8G28. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
239 252Right-handed alpha
Helix 2
AA2
A
254 269Right-handed alpha
Helix 3
AA3
A
270 285Right-handed alpha
Helix 4
AA4
A
286 289Right-handed 310
Helix 5
AA5
A
290 308Right-handed alpha
Helix 6
AA6
A
311 325Right-handed alpha
Helix 7
AA7
A
330 343Right-handed alpha
Helix 8
AA8
B
242 252Right-handed alpha
Helix 9
AA9
B
254 269Right-handed alpha
Helix 10
AB1
B
270 285Right-handed alpha
Helix 11
AB2
B
286 289Right-handed 310
Helix 12
AB3
B
290 308Right-handed alpha
Helix 13
AB4
B
311 326Right-handed alpha
Helix 14
AB5
B
330 343Right-handed alpha
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There are no sheets in PDB entry 8G28
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