Analysis of interatomic Contacts of Structural Units in PDB entry:
8G2E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G2E entry

There is 1 chain in PDB entry 8G2E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 13PRO 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8G2E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
25 32Right-handed alpha
Helix 3
AA3
A
57 68Right-handed alpha
Helix 4
AA4
A
80 97Right-handed alpha
Helix 5
AA5
A
145 149Right-handed 310
Helix 6
AA6
A
163 168Right-handed alpha
Helix 7
AA7
A
222 235Right-handed alpha
Helix 8
AA8
A
247 259Right-handed alpha
Helix 9
AA9
A
273 279Right-handed alpha
Helix 10
AB1
A
279 287Right-handed alpha
Helix 11
AB2
A
294 301Right-handed alpha
Helix 12
AB3
A
302 304Right-handed 310
Helix 13
AB4
A
305 321Right-handed alpha
Helix 14
AB5
A
331 336Right-handed 310
Helix 15
AB6
A
341 355Right-handed alpha
Helix 16
AB7
A
362 367Right-handed alpha
Helix 17
AB8
A
370 388Right-handed alpha
Helix 18
AB9
A
390 401Right-handed alpha
Helix 19
AC1
A
407 423Right-handed alpha
Helix 20
AC2
A
435 443Right-handed alpha
Helix 21
AC3
A
456 463Right-handed alpha
Helix 22
AC4
A
464 466Right-handed 310
Helix 23
AC5
A
481 500Right-handed alpha
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There are 4 sheets in PDB entry 8G2E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
71 75parallel
Strand 3
A
109 113parallel
Strand 4
A
239 242parallel
Strand 5
A
266 271parallel
Strand 6
A
289 293parallel
Strand 7
A
324 327parallel
Strand 8
A
358 361parallel
Strand 9
A
46 50parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
208 210anti-parallel
Strand 3
A
173 176anti-parallel
Strand 4
A
181 188anti-parallel
Strand 5
A
192 199anti-parallel
Strand 6
A
139 143anti-parallel
Strand 7
A
156 158parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
201 203anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 473first strand
Strand 2
A
450 454parallel
Strand 3
A
428 431parallel
Strand 4
A
508 514parallel
Strand 5
A
522 529anti-parallel
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