Analysis of interatomic Contacts of Structural Units in PDB entry:
8G2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G2H entry

There is 1 chain in PDB entry 8G2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 144THR 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8G2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
144 154Right-handed alpha
Helix 2
AA2
A
155 164Right-handed alpha
Helix 3
AA3
A
165 179Right-handed alpha
Helix 4
AA4
A
180 183Right-handed 310
Helix 5
AA5
A
196 205Right-handed alpha
Helix 6
AA6
A
217 229Right-handed alpha
Helix 7
AA7
A
267 275Right-handed alpha
Helix 8
AA8
A
299 309Right-handed alpha
Helix 9
AA9
A
310 315Right-handed 310
Helix 10
AB1
A
323 325Right-handed 310
Helix 11
AB2
A
326 336Right-handed alpha
Helix 12
AB3
A
344 348Right-handed 310
Helix 13
AB4
A
363 367Right-handed 310
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There are 4 sheets in PDB entry 8G2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 239first strand
Strand 2
A
209 214parallel
Strand 3
A
187 191parallel
Strand 4
A
251 256parallel
Strand 5
A
279 286parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 358first strand
Strand 2
A
289 297anti-parallel
Strand 3
A
382 396anti-parallel
Strand 4
A
401 405anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 358first strand
Strand 2
A
289 297anti-parallel
Strand 3
A
382 396anti-parallel
Strand 4
A
417 428anti-parallel
Strand 5
A
339 341anti-parallel
Strand 6
A
473 474parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 377first strand
Strand 2
A
433 442anti-parallel
Strand 3
A
448 456anti-parallel
Strand 4
A
462 468anti-parallel
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