Analysis of interatomic Contacts of Structural Units in PDB entry:
8G3A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G3A entry

There are 5 chains in PDB entry 8G3A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 646
B
 ILE 3LEU 246
C
 ILE 3LEU 246
D
 MET 1VAL 334
E
 MET 1VAL 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 8G3A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
18 40Right-handed alpha
Helix 3
AA3
A
41 47Right-handed 310
Helix 4
AA4
A
56 81Right-handed alpha
Helix 5
AA5
A
83 94Right-handed alpha
Helix 6
AA6
A
96 105Right-handed alpha
Helix 7
AA7
A
108 126Right-handed alpha
Helix 8
AA8
A
126 138Right-handed alpha
Helix 9
AA9
A
150 178Right-handed alpha
Helix 10
AB1
A
198 220Right-handed alpha
Helix 11
AB2
A
231 254Right-handed alpha
Helix 12
AB3
A
254 265Right-handed alpha
Helix 13
AB4
A
272 279Right-handed alpha
Helix 14
AB5
A
290 325Right-handed alpha
Helix 15
AB6
A
333 346Right-handed alpha
Helix 16
AB7
A
365 369Right-handed 310
Helix 17
AB8
A
379 382Right-handed 310
Helix 18
AB9
A
409 416Right-handed alpha
Helix 19
AC1
A
461 472Right-handed alpha
Helix 20
AC2
A
493 505Right-handed alpha
Helix 21
AC3
A
518 557Right-handed alpha
Helix 22
AC4
A
557 565Right-handed alpha
Helix 23
AC5
A
570 602Right-handed alpha
Helix 24
AC6
A
603 605Right-handed 310
Helix 25
AC7
A
614 633Right-handed alpha
Helix 26
AC8
A
634 644Right-handed alpha
Helix 27
AC9
B
45 54Right-handed alpha
Helix 28
AD1
B
75 86Right-handed alpha
Helix 29
AD2
B
101 106Right-handed alpha
Helix 30
AD3
B
108 113Right-handed 310
Helix 31
AD4
B
117 129Right-handed alpha
Helix 32
AD5
B
133 137Right-handed 310
Helix 33
AD6
B
140 144Right-handed 310
Helix 34
AD7
B
148 159Right-handed alpha
Helix 35
AD8
B
175 193Right-handed alpha
Helix 36
AD9
B
203 209Right-handed alpha
Helix 37
AE1
B
231 246Right-handed alpha
Helix 38
AE2
C
45 54Right-handed alpha
Helix 39
AE3
C
75 86Right-handed alpha
Helix 40
AE4
C
101 108Right-handed alpha
Helix 41
AE5
C
109 112Right-handed 310
Helix 42
AE6
C
116 132Right-handed alpha
Helix 43
AE7
C
145 157Right-handed alpha
Helix 44
AE8
C
175 193Right-handed alpha
Helix 45
AE9
C
203 208Right-handed alpha
Helix 46
AF1
C
233 246Right-handed alpha
Helix 47
AF2
D
2 9Right-handed alpha
Helix 48
AF3
D
12 29Right-handed alpha
Helix 49
AF4
D
34 61Right-handed alpha
Helix 50
AF5
D
62 72Right-handed alpha
Helix 51
AF6
D
75 79Right-handed 310
Helix 52
AF7
D
84 138Right-handed alpha
Helix 53
AF8
D
142 169Right-handed alpha
Helix 54
AF9
D
170 175Right-handed 310
Helix 55
AG1
D
183 194Right-handed alpha
Helix 56
AG2
D
194 202Right-handed alpha
Helix 57
AG3
D
217 236Right-handed alpha
Helix 58
AG4
D
264 271Right-handed 310
Helix 59
AG5
D
281 285Right-handed 310
Helix 60
AG6
D
290 300Right-handed alpha
Helix 61
AG7
D
324 327Right-handed 310
Helix 62
AG8
D
328 334Right-handed alpha
Helix 63
AG9
E
2 9Right-handed alpha
Helix 64
AH1
E
9 30Right-handed alpha
Helix 65
AH2
E
38 61Right-handed alpha
Helix 66
AH3
E
62 72Right-handed alpha
Helix 67
AH4
E
84 138Right-handed alpha
Helix 68
AH5
E
143 169Right-handed alpha
Helix 69
AH6
E
170 175Right-handed 310
Helix 70
AH7
E
183 194Right-handed alpha
Helix 71
AH8
E
194 202Right-handed alpha
Helix 72
AH9
E
218 235Right-handed alpha
Helix 73
AI1
E
267 271Right-handed 310
Helix 74
AI2
E
281 286Right-handed 310
Helix 75
AI3
E
290 300Right-handed alpha
Helix 76
AI4
E
324 327Right-handed 310
Helix 77
AI5
E
328 333Right-handed alpha
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There are 11 sheets in PDB entry 8G3A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
511 512anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 364first strand
Strand 2
A
383 388anti-parallel
Strand 3
A
457 459parallel
Strand 4
A
402 406anti-parallel
Strand 5
A
434 440parallel
Strand 6
A
424 426anti-parallel
Strand 7
A
359 364anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 26first strand
Strand 2
B
4 14anti-parallel
Strand 3
B
61 66anti-parallel
Strand 4
B
69 70anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 90first strand
Strand 2
B
164 168parallel
Strand 3
B
196 200parallel
Strand 4
B
35 39parallel
Strand 5
B
212 215parallel
Strand 6
B
224 225anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 10first strand
Strand 2
C
61 66anti-parallel
Strand 3
C
69 70anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 40first strand
Strand 2
C
213 216parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 90first strand
Strand 2
C
164 167parallel
Strand 3
C
196 199parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
179 182first strand
Strand 2
D
213 216anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
204 209first strand
Strand 2
D
240 248parallel
Strand 3
D
251 258anti-parallel
Strand 4
D
315 321anti-parallel
Strand 5
D
305 311anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
178 182first strand
Strand 2
E
213 217anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
205 209first strand
Strand 2
E
241 248parallel
Strand 3
E
251 257anti-parallel
Strand 4
E
315 321anti-parallel
Strand 5
E
305 311anti-parallel
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