Analysis of interatomic Contacts of Structural Units in PDB entry:
8G4H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G4H entry

There are 2 chains in PDB entry 8G4H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 169LYS 320
B
 MET 1GLU 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8G4H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
169 178Right-handed alpha
Helix 2
AA2
A
179 190Right-handed alpha
Helix 3
AA3
A
202 211Right-handed alpha
Helix 4
AA4
A
212 223Right-handed alpha
Helix 5
AA5
A
235 244Right-handed alpha
Helix 6
AA6
A
245 255Right-handed alpha
Helix 7
AA7
A
268 277Right-handed alpha
Helix 8
AA8
A
278 288Right-handed alpha
Helix 9
AA9
A
301 310Right-handed alpha
Helix 10
AB1
A
311 320Right-handed alpha
Helix 11
AB2
B
15 26Right-handed alpha
Helix 12
AB3
B
65 75Right-handed alpha
Helix 13
AB4
B
87 104Right-handed alpha
Helix 14
AB5
B
126 138Right-handed alpha
Helix 15
AB6
B
151 168Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8G4H.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 46first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
3 10parallel
Strand 4
B
77 83parallel
Strand 5
B
111 116parallel
Strand 6
B
141 143parallel
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