Analysis of interatomic Contacts of Structural Units in PDB entry:
8G54


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G54 entry

There are 5 chains in PDB entry 8G54 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 274LEU 325
B
 LYS 274LEU 325
C
 LYS 274LEU 325
D
 LYS 274LEU 325
E
 LYS 274LEU 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8G54

There are 6 sheets in PDB entry 8G54. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 277first strand
Strand 2
B
275 277parallel
Strand 3
C
275 277parallel
Strand 4
D
275 277parallel
Strand 5
E
275 277parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
B
281 282parallel
Strand 3
C
281 282parallel
Strand 4
D
281 282parallel
Strand 5
E
281 282parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
B
288 291parallel
Strand 3
C
288 291parallel
Strand 4
D
288 291parallel
Strand 5
E
288 291parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
B
297 298parallel
Strand 3
C
297 298parallel
Strand 4
D
297 298parallel
Strand 5
E
297 298parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 308first strand
Strand 2
B
305 308parallel
Strand 3
C
305 308parallel
Strand 4
D
305 308parallel
Strand 5
E
305 308parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 323first strand
Strand 2
B
313 323parallel
Strand 3
C
313 323parallel
Strand 4
D
313 323parallel
Strand 5
E
313 323parallel
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