Analysis of interatomic Contacts of Structural Units in PDB entry:
8G5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G5I entry

There are 5 chains in PDB entry 8G5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 74LYS 1228
B
 ALA 68VAL 485
C
 GLU 67VAL 485
P
 A 10 DA 27
T
 C 3 T 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8G5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 109Right-handed alpha
Helix 2
AA2
A
137 159Right-handed alpha
Helix 3
AA3
A
180 182Right-handed 310
Helix 4
AA4
A
271 276Right-handed alpha
Helix 5
AA5
A
277 283Right-handed 310
Helix 6
AA6
A
294 302Right-handed alpha
Helix 7
AA7
A
306 315Right-handed alpha
Helix 8
AA8
A
345 350Right-handed 310
Helix 9
AA9
A
355 364Right-handed alpha
Helix 10
AB1
A
375 380Right-handed alpha
Helix 11
AB2
A
381 388Right-handed alpha
Helix 12
AB3
A
388 418Right-handed alpha
Helix 13
AB4
A
420 431Right-handed alpha
Helix 14
AB5
A
439 471Right-handed alpha
Helix 15
AB6
A
484 488Right-handed 310
Helix 16
AB7
A
535 538Right-handed 310
Helix 17
AB8
A
539 556Right-handed alpha
Helix 18
AB9
A
570 577Right-handed alpha
Helix 19
AC1
A
598 603Right-handed alpha
Helix 20
AC2
A
648 655Right-handed alpha
Helix 21
AC3
A
754 758Right-handed 310
Helix 22
AC4
A
786 810Right-handed alpha
Helix 23
AC5
A
822 828Right-handed alpha
Helix 24
AC6
A
871 878Right-handed 310
Helix 25
AC7
A
893 908Right-handed alpha
Helix 26
AC8
A
914 921Right-handed alpha
Helix 27
AC9
A
944 954Right-handed alpha
Helix 28
AD1
A
958 969Right-handed alpha
Helix 29
AD2
A
973 984Right-handed alpha
Helix 30
AD3
A
1057 1066Right-handed alpha
Helix 31
AD4
A
1092 1123Right-handed alpha
Helix 32
AD5
A
1145 1167Right-handed alpha
Helix 33
AD6
A
1217 1221Right-handed 310
Helix 34
AD7
B
69 77Right-handed alpha
Helix 35
AD8
B
87 94Right-handed alpha
Helix 36
AD9
B
100 119Right-handed alpha
Helix 37
AE1
B
185 200Right-handed alpha
Helix 38
AE2
B
247 265Right-handed alpha
Helix 39
AE3
B
269 271Right-handed 310
Helix 40
AE4
B
308 315Right-handed alpha
Helix 41
AE5
B
319 323Right-handed 310
Helix 42
AE6
B
342 354Right-handed alpha
Helix 43
AE7
B
395 410Right-handed alpha
Helix 44
AE8
B
421 425Right-handed 310
Helix 45
AE9
B
426 435Right-handed alpha
Helix 46
AF1
B
445 450Right-handed alpha
Helix 47
AF2
B
470 484Right-handed alpha
Helix 48
AF3
C
68 76Right-handed alpha
Helix 49
AF4
C
82 87Right-handed alpha
Helix 50
AF5
C
88 93Right-handed alpha
Helix 51
AF6
C
100 119Right-handed alpha
Helix 52
AF7
C
184 191Right-handed alpha
Helix 53
AF8
C
192 200Right-handed alpha
Helix 54
AF9
C
247 266Right-handed alpha
Helix 55
AG1
C
269 271Right-handed 310
Helix 56
AG2
C
342 354Right-handed alpha
Helix 57
AG3
C
393 409Right-handed alpha
Helix 58
AG4
C
425 435Right-handed alpha
Helix 59
AG5
C
444 449Right-handed 310
Helix 60
AG6
C
470 485Right-handed alpha
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There are 9 sheets in PDB entry 8G5I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
A
175 178anti-parallel
Strand 3
A
220 223anti-parallel
Strand 4
A
211 215anti-parallel
Strand 5
A
194 200anti-parallel
Strand 6
A
264 268parallel
Strand 7
A
289 293parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 438first strand
Strand 2
A
837 839anti-parallel
Strand 3
A
814 816anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
605 606first strand
Strand 2
A
779 780anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1130 1133first strand
Strand 2
A
1136 1142anti-parallel
Strand 3
A
884 890anti-parallel
Strand 4
A
1184 1186anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 127first strand
Strand 2
B
206 216parallel
Strand 3
B
232 243anti-parallel
Strand 4
B
334 341anti-parallel
Strand 5
B
297 305anti-parallel
Strand 6
B
285 292anti-parallel
Strand 7
B
273 279anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 325first strand
Strand 2
B
330 331anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
413 414first strand
Strand 2
B
381 384parallel
Strand 3
B
437 442parallel
Strand 4
B
452 455anti-parallel
Strand 5
B
464 467anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 127first strand
Strand 2
C
206 218parallel
Strand 3
C
230 243anti-parallel
Strand 4
C
334 341anti-parallel
Strand 5
C
297 306anti-parallel
Strand 6
C
286 292anti-parallel
Strand 7
C
273 277anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
413 415first strand
Strand 2
C
383 387parallel
Strand 3
C
439 443parallel
Strand 4
C
453 457anti-parallel
Strand 5
C
463 466anti-parallel
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