Analysis of interatomic Contacts of Structural Units in PDB entry:
8G5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G5T entry

There are 4 chains in PDB entry 8G5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8THR 488
B
 PRO 8THR 488
C
 PRO 8THR 488
D
 PRO 8THR 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 8G5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 19Right-handed alpha
Helix 2
AA2
A
31 35Right-handed 310
Helix 3
AA3
A
67 71Right-handed 310
Helix 4
AA4
A
86 96Right-handed alpha
Helix 5
AA5
A
99 105Right-handed alpha
Helix 6
AA6
A
129 133Right-handed 310
Helix 7
AA7
A
140 160Right-handed alpha
Helix 8
AA8
A
162 166Right-handed 310
Helix 9
AA9
A
167 182Right-handed alpha
Helix 10
AB1
A
193 207Right-handed alpha
Helix 11
AB2
A
226 231Right-handed alpha
Helix 12
AB3
A
231 249Right-handed alpha
Helix 13
AB4
A
259 275Right-handed alpha
Helix 14
AB5
A
290 300Right-handed alpha
Helix 15
AB6
A
301 304Right-handed 310
Helix 16
AB7
A
305 318Right-handed alpha
Helix 17
AB8
A
323 334Right-handed alpha
Helix 18
AB9
A
339 353Right-handed alpha
Helix 19
AC1
A
359 374Right-handed alpha
Helix 20
AC2
A
377 383Right-handed alpha
Helix 21
AC3
A
385 390Right-handed 310
Helix 22
AC4
A
422 434Right-handed alpha
Helix 23
AC5
A
456 470Right-handed alpha
Helix 24
AC6
B
11 19Right-handed alpha
Helix 25
AC7
B
31 35Right-handed 310
Helix 26
AC8
B
67 71Right-handed 310
Helix 27
AC9
B
86 96Right-handed alpha
Helix 28
AD1
B
99 105Right-handed alpha
Helix 29
AD2
B
129 133Right-handed 310
Helix 30
AD3
B
140 160Right-handed alpha
Helix 31
AD4
B
162 166Right-handed 310
Helix 32
AD5
B
167 182Right-handed alpha
Helix 33
AD6
B
193 207Right-handed alpha
Helix 34
AD7
B
220 224Right-handed 310
Helix 35
AD8
B
226 231Right-handed alpha
Helix 36
AD9
B
231 249Right-handed alpha
Helix 37
AE1
B
259 275Right-handed alpha
Helix 38
AE2
B
290 300Right-handed alpha
Helix 39
AE3
B
301 304Right-handed 310
Helix 40
AE4
B
305 318Right-handed alpha
Helix 41
AE5
B
323 334Right-handed alpha
Helix 42
AE6
B
339 353Right-handed alpha
Helix 43
AE7
B
359 374Right-handed alpha
Helix 44
AE8
B
377 383Right-handed alpha
Helix 45
AE9
B
385 390Right-handed 310
Helix 46
AF1
B
422 434Right-handed alpha
Helix 47
AF2
B
456 470Right-handed alpha
Helix 48
AF3
C
11 20Right-handed alpha
Helix 49
AF4
C
31 35Right-handed 310
Helix 50
AF5
C
67 71Right-handed 310
Helix 51
AF6
C
86 98Right-handed alpha
Helix 52
AF7
C
101 105Right-handed alpha
Helix 53
AF8
C
127 133Right-handed 310
Helix 54
AF9
C
140 160Right-handed alpha
Helix 55
AG1
C
162 166Right-handed 310
Helix 56
AG2
C
167 182Right-handed alpha
Helix 57
AG3
C
193 207Right-handed alpha
Helix 58
AG4
C
220 224Right-handed 310
Helix 59
AG5
C
225 231Right-handed alpha
Helix 60
AG6
C
231 249Right-handed alpha
Helix 61
AG7
C
259 275Right-handed alpha
Helix 62
AG8
C
290 300Right-handed alpha
Helix 63
AG9
C
301 304Right-handed 310
Helix 64
AH1
C
305 318Right-handed alpha
Helix 65
AH2
C
323 334Right-handed alpha
Helix 66
AH3
C
339 353Right-handed alpha
Helix 67
AH4
C
359 374Right-handed alpha
Helix 68
AH5
C
377 383Right-handed alpha
Helix 69
AH6
C
385 390Right-handed 310
Helix 70
AH7
C
422 434Right-handed alpha
Helix 71
AH8
C
456 470Right-handed alpha
Helix 72
AH9
D
11 20Right-handed alpha
Helix 73
AI1
D
31 35Right-handed 310
Helix 74
AI2
D
67 71Right-handed 310
Helix 75
AI3
D
86 96Right-handed alpha
Helix 76
AI4
D
99 105Right-handed alpha
Helix 77
AI5
D
127 133Right-handed 310
Helix 78
AI6
D
140 160Right-handed alpha
Helix 79
AI7
D
162 166Right-handed 310
Helix 80
AI8
D
167 182Right-handed alpha
Helix 81
AI9
D
193 207Right-handed alpha
Helix 82
AJ1
D
220 224Right-handed 310
Helix 83
AJ2
D
225 231Right-handed alpha
Helix 84
AJ3
D
231 249Right-handed alpha
Helix 85
AJ4
D
259 275Right-handed alpha
Helix 86
AJ5
D
290 300Right-handed alpha
Helix 87
AJ6
D
301 304Right-handed 310
Helix 88
AJ7
D
305 318Right-handed alpha
Helix 89
AJ8
D
323 334Right-handed alpha
Helix 90
AJ9
D
339 353Right-handed alpha
Helix 91
AK1
D
359 374Right-handed alpha
Helix 92
AK2
D
377 383Right-handed alpha
Helix 93
AK3
D
385 390Right-handed 310
Helix 94
AK4
D
422 434Right-handed alpha
Helix 95
AK5
D
456 470Right-handed alpha
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There are 4 sheets in PDB entry 8G5T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
38 45anti-parallel
Strand 3
A
55 62anti-parallel
Strand 4
A
106 111anti-parallel
Strand 5
A
73 77parallel
Strand 6
A
187 192parallel
Strand 7
A
210 216parallel
Strand 8
A
410 415parallel
Strand 9
A
437 442parallel
Strand 10
A
477 479parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 27first strand
Strand 2
B
38 45anti-parallel
Strand 3
B
55 62anti-parallel
Strand 4
B
106 111anti-parallel
Strand 5
B
73 77parallel
Strand 6
B
187 192parallel
Strand 7
B
210 216parallel
Strand 8
B
410 415parallel
Strand 9
B
437 442parallel
Strand 10
B
477 479parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 27first strand
Strand 2
C
38 45anti-parallel
Strand 3
C
55 62anti-parallel
Strand 4
C
106 111anti-parallel
Strand 5
C
73 77parallel
Strand 6
C
187 192parallel
Strand 7
C
210 216parallel
Strand 8
C
410 415parallel
Strand 9
C
437 442parallel
Strand 10
C
477 479parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 27first strand
Strand 2
D
38 45anti-parallel
Strand 3
D
55 62anti-parallel
Strand 4
D
106 111anti-parallel
Strand 5
D
73 77parallel
Strand 6
D
187 192parallel
Strand 7
D
210 216parallel
Strand 8
D
410 415parallel
Strand 9
D
437 442parallel
Strand 10
D
477 479parallel
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