Analysis of interatomic Contacts of Structural Units in PDB entry:
8G7E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8G7E entry

There are 8 chains in PDB entry 8G7E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	C 9	G 38
B	C 1	G 31
G	PHE 8	VAL 232
H	VAL 5	ASP 233
K	ALA 2	LEU 80
R	G 1	A 47
I	VAL 2	ASP 1341
J	GLU 16	ARG 1373

There are101 helices in PDB entry 8G7E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	87	Right-handed alpha
Helix 3	AA3	G	113	115	Right-handed 310
Helix 4	AA4	G	212	229	Right-handed alpha
Helix 5	AA5	H	35	50	Right-handed alpha
Helix 6	AA6	H	77	88	Right-handed alpha
Helix 7	AA7	H	212	228	Right-handed alpha
Helix 8	AA8	K	6	13	Right-handed alpha
Helix 9	AA9	K	16	32	Right-handed alpha
Helix 10	AB1	K	45	56	Right-handed alpha
Helix 11	AB2	K	60	79	Right-handed alpha
Helix 12	AB3	I	28	40	Right-handed alpha
Helix 13	AB4	I	49	56	Right-handed alpha
Helix 14	AB5	I	81	89	Right-handed alpha
Helix 15	AB6	I	163	167	Right-handed 310
Helix 16	AB7	I	198	201	Right-handed 310
Helix 17	AB8	I	206	213	Right-handed alpha
Helix 18	AB9	I	216	224	Right-handed alpha
Helix 19	AC1	I	242	247	Right-handed alpha
Helix 20	AC2	I	270	281	Right-handed alpha
Helix 21	AC3	I	318	329	Right-handed alpha
Helix 22	AC4	I	345	354	Right-handed alpha
Helix 23	AC5	I	358	371	Right-handed alpha
Helix 24	AC6	I	377	391	Right-handed alpha
Helix 25	AC7	I	398	409	Right-handed alpha
Helix 26	AC8	I	421	438	Right-handed alpha
Helix 27	AC9	I	455	482	Right-handed alpha
Helix 28	AD1	I	488	493	Right-handed alpha
Helix 29	AD2	I	495	508	Right-handed alpha
Helix 30	AD3	I	519	528	Right-handed alpha
Helix 31	AD4	I	544	549	Right-handed alpha
Helix 32	AD5	I	551	555	Right-handed 310
Helix 33	AD6	I	662	667	Right-handed alpha
Helix 34	AD7	I	677	684	Right-handed alpha
Helix 35	AD8	I	704	712	Right-handed alpha
Helix 36	AD9	I	820	825	Right-handed alpha
Helix 37	AE1	I	858	864	Right-handed alpha
Helix 38	AE2	I	942	981	Right-handed alpha
Helix 39	AE3	I	985	992	Right-handed alpha
Helix 40	AE4	I	1007	1038	Right-handed alpha
Helix 41	AE5	I	1081	1085	Right-handed 310
Helix 42	AE6	I	1101	1106	Right-handed alpha
Helix 43	AE7	I	1109	1134	Right-handed alpha
Helix 44	AE8	I	1137	1151	Right-handed alpha
Helix 45	AE9	I	1165	1176	Right-handed alpha
Helix 46	AF1	I	1191	1202	Right-handed alpha
Helix 47	AF2	I	1271	1281	Right-handed alpha
Helix 48	AF3	I	1284	1292	Right-handed alpha
Helix 49	AF4	I	1300	1309	Right-handed alpha
Helix 50	AF5	I	1320	1332	Right-handed alpha
Helix 51	AF6	J	26	34	Right-handed alpha
Helix 52	AF7	J	94	100	Right-handed 310
Helix 53	AF8	J	113	118	Right-handed alpha
Helix 54	AF9	J	122	129	Right-handed alpha
Helix 55	AG1	J	131	140	Right-handed alpha
Helix 56	AG2	J	161	172	Right-handed alpha
Helix 57	AG3	J	181	192	Right-handed alpha
Helix 58	AG4	J	193	208	Right-handed alpha
Helix 59	AG5	J	211	230	Right-handed alpha
Helix 60	AG6	J	233	236	Right-handed 310
Helix 61	AG7	J	246	250	Right-handed 310
Helix 62	AG8	J	263	285	Right-handed alpha
Helix 63	AG9	J	288	308	Right-handed alpha
Helix 64	AH1	J	327	331	Right-handed 310
Helix 65	AH2	J	370	377	Right-handed alpha
Helix 66	AH3	J	377	388	Right-handed alpha
Helix 67	AH4	J	393	403	Right-handed alpha
Helix 68	AH5	J	405	416	Right-handed alpha
Helix 69	AH6	J	430	432	Right-handed 310
Helix 70	AH7	J	450	455	Right-handed 310
Helix 71	AH8	J	473	483	Right-handed alpha
Helix 72	AH9	J	485	489	Right-handed 310
Helix 73	AI1	J	504	514	Right-handed alpha
Helix 74	AI2	J	529	540	Right-handed alpha
Helix 75	AI3	J	574	580	Right-handed alpha
Helix 76	AI4	J	589	593	Right-handed 310
Helix 77	AI5	J	598	612	Right-handed alpha
Helix 78	AI6	J	613	634	Right-handed alpha
Helix 79	AI7	J	640	644	Right-handed 310
Helix 80	AI8	J	649	670	Right-handed alpha
Helix 81	AI9	J	674	703	Right-handed alpha
Helix 82	AJ1	J	720	728	Right-handed alpha
Helix 83	AJ2	J	733	742	Right-handed alpha
Helix 84	AJ3	J	768	804	Right-handed alpha
Helix 85	AJ4	J	834	839	Right-handed alpha
Helix 86	AJ5	J	865	875	Right-handed alpha
Helix 87	AJ6	J	895	900	Right-handed alpha
Helix 88	AJ7	J	914	925	Right-handed alpha
Helix 89	AJ8	J	926	929	Right-handed 310
Helix 90	AJ9	J	1068	1074	Right-handed alpha
Helix 91	AK1	J	1137	1147	Right-handed alpha
Helix 92	AK2	J	1216	1224	Right-handed alpha
Helix 93	AK3	J	1225	1245	Right-handed alpha
Helix 94	AK4	J	1249	1261	Right-handed alpha
Helix 95	AK5	J	1282	1295	Right-handed alpha
Helix 96	AK6	J	1308	1313	Right-handed alpha
Helix 97	AK7	J	1314	1316	Right-handed 310
Helix 98	AK8	J	1321	1325	Right-handed 310
Helix 99	AK9	J	1327	1339	Right-handed alpha
Helix 100	AL1	J	1348	1354	Right-handed alpha
Helix 101	AL2	J	1362	1373	Right-handed alpha

There are 43 sheets in PDB entry 8G7E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	31	first strand
Strand 2	G	199	207	anti-parallel
Strand 3	G	180	189	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	98	99	first strand
Strand 2	G	139	149	anti-parallel
Strand 3	G	102	105	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	98	99	first strand
Strand 2	G	139	149	anti-parallel
Strand 3	G	53	61	anti-parallel
Strand 4	G	171	172	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	91	first strand
Strand 2	G	122	123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	151	153	first strand
Strand 2	G	175	177	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	14	15	first strand
Strand 2	H	23	28	anti-parallel
Strand 3	H	198	207	anti-parallel
Strand 4	H	180	190	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	52	61	first strand
Strand 2	H	142	150	anti-parallel
Strand 3	H	97	102	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	110	first strand
Strand 2	H	131	133	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	14	first strand
Strand 2	I	1182	1183	parallel
Strand 3	I	700	701	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	66	75	first strand
Strand 2	I	93	104	anti-parallel
Strand 3	I	120	128	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	454	first strand
Strand 2	I	147	151	anti-parallel
Strand 3	I	529	531	parallel
Strand 4	I	572	574	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	158	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	188	anti-parallel
Strand 4	I	194	196	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	228	231	first strand
Strand 2	I	332	335	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	239	240	first strand
Strand 2	I	284	285	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	599	607	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	594	anti-parallel
Strand 3	I	652	653	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	616	617	first strand
Strand 2	I	633	637	anti-parallel
Strand 3	I	642	646	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	716	717	first strand
Strand 2	I	782	785	anti-parallel
Strand 3	I	768	769	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	748	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	727	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1066	1068	first strand
Strand 2	I	1225	1234	anti-parallel
Strand 3	I	798	804	anti-parallel
Strand 4	I	1096	1098	parallel
Strand 5	I	816	819	anti-parallel
Strand 6	I	1076	1080	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1066	1068	first strand
Strand 2	I	1225	1234	anti-parallel
Strand 3	I	1209	1210	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	841	first strand
Strand 2	I	1046	1058	anti-parallel
Strand 3	I	927	935	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1340	first strand
Strand 2	J	19	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	103	112	first strand
Strand 2	J	238	244	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	159	160	first strand
Strand 2	J	144	147	anti-parallel
Strand 3	J	177	179	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	365	369	first strand
Strand 2	J	434	442	parallel
Strand 3	J	421	424	anti-parallel
Strand 4	J	465	469	anti-parallel
Strand 5	J	350	356	anti-parallel
Strand 6	J	447	448	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	527	first strand
Strand 2	J	547	556	parallel
Strand 3	J	564	573	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	706	708	first strand
Strand 2	J	713	715	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	825	826	first strand
Strand 2	J	831	833	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	951	first strand
Strand 2	J	1016	1019	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	957	960	first strand
Strand 2	J	980	985	anti-parallel
Strand 3	J	991	997	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	965	967	first strand
Strand 2	J	973	975	anti-parallel
Strand 3	J	1001	1002	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1027	1028	first strand
Strand 2	J	1120	1122	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1098	1099	first strand
Strand 2	J	1077	1081	anti-parallel
Strand 3	J	1033	1038	anti-parallel
Strand 4	J	1114	1115	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1046	1049	first strand
Strand 2	J	1058	1061	anti-parallel
Strand 3	J	1105	1107	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1161	1162	first strand
Strand 2	J	1203	1204	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1176	1177	first strand
Strand 2	J	1186	1187	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1268	anti-parallel
Strand 3	J	1301	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8G7E

Analysis of interatomic Contacts of Structural Units in PDB entry:
8G7E