Analysis of interatomic Contacts of Structural Units in PDB entry:
8G7T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8G7T entry

There are 6 chains in PDB entry 8G7T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 241	MET 923
B	SER 252	VAL 430
C	PHE 241	ALA 921
D	SER 252	VAL 430
X	G 2	A 24
Y	C 2	C 24

There are 45 helices in PDB entry 8G7T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	245	250	Right-handed alpha
Helix 2	AA2	A	268	284	Right-handed alpha
Helix 3	AA3	A	299	312	Right-handed alpha
Helix 4	AA4	A	333	339	Right-handed alpha
Helix 5	AA5	A	347	358	Right-handed alpha
Helix 6	AA6	A	362	366	Right-handed 310
Helix 7	AA7	A	373	377	Right-handed 310
Helix 8	AA8	A	381	395	Right-handed alpha
Helix 9	AA9	A	419	434	Right-handed alpha
Helix 10	AB1	A	445	450	Right-handed alpha
Helix 11	AB2	A	469	487	Right-handed alpha
Helix 12	AB3	A	493	497	Right-handed 310
Helix 13	AB4	A	506	520	Right-handed alpha
Helix 14	AB5	A	530	558	Right-handed alpha
Helix 15	AB6	A	559	578	Right-handed alpha
Helix 16	AB7	A	580	592	Right-handed alpha
Helix 17	AB8	A	593	601	Right-handed alpha
Helix 18	AB9	A	608	625	Right-handed alpha
Helix 19	AC1	A	641	648	Right-handed alpha
Helix 20	AC2	A	650	654	Right-handed 310
Helix 21	AC3	A	744	770	Right-handed alpha
Helix 22	AC4	A	772	780	Right-handed alpha
Helix 23	AC5	A	780	794	Right-handed alpha
Helix 24	AC6	A	836	840	Right-handed 310
Helix 25	AC7	C	244	251	Right-handed alpha
Helix 26	AC8	C	267	284	Right-handed alpha
Helix 27	AC9	C	299	314	Right-handed alpha
Helix 28	AD1	C	333	341	Right-handed alpha
Helix 29	AD2	C	347	358	Right-handed alpha
Helix 30	AD3	C	362	366	Right-handed 310
Helix 31	AD4	C	374	377	Right-handed 310
Helix 32	AD5	C	381	395	Right-handed alpha
Helix 33	AD6	C	419	435	Right-handed alpha
Helix 34	AD7	C	445	450	Right-handed alpha
Helix 35	AD8	C	469	487	Right-handed alpha
Helix 36	AD9	C	506	520	Right-handed alpha
Helix 37	AE1	C	530	558	Right-handed alpha
Helix 38	AE2	C	560	576	Right-handed alpha
Helix 39	AE3	C	580	593	Right-handed alpha
Helix 40	AE4	C	593	603	Right-handed alpha
Helix 41	AE5	C	609	625	Right-handed alpha
Helix 42	AE6	C	636	648	Right-handed alpha
Helix 43	AE7	C	745	769	Right-handed alpha
Helix 44	AE8	C	772	793	Right-handed alpha
Helix 45	AE9	C	907	911	Right-handed 310

There are 16 sheets in PDB entry 8G7T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	296	first strand
Strand 2	A	368	371	parallel
Strand 3	A	404	406	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	322	first strand
Strand 2	A	343	344	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	457	462	first strand
Strand 2	A	737	742	parallel
Strand 3	A	712	715	parallel
Strand 4	A	631	633	parallel
Strand 5	A	695	696	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	816	819	first strand
Strand 2	A	807	810	anti-parallel
Strand 3	A	892	895	anti-parallel
Strand 4	A	902	903	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	831	833	first strand
Strand 2	A	823	825	anti-parallel
Strand 3	A	916	917	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	842	843	first strand
Strand 2	A	863	864	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	858	860	first strand
Strand 2	A	874	878	anti-parallel
Strand 3	A	883	887	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	280	282	first strand
Strand 2	B	424	426	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	302	first strand
Strand 2	B	412	416	anti-parallel
Strand 3	B	325	329	anti-parallel
Strand 4	B	348	351	anti-parallel
Strand 5	B	357	360	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	318	first strand
Strand 2	B	375	381	anti-parallel
Strand 3	B	386	388	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	294	296	first strand
Strand 2	C	369	372	parallel
Strand 3	C	407	408	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	460	462	first strand
Strand 2	C	737	742	parallel
Strand 3	C	711	715	parallel
Strand 4	C	630	633	parallel
Strand 5	C	693	694	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	816	819	first strand
Strand 2	C	806	809	anti-parallel
Strand 3	C	893	896	anti-parallel
Strand 4	C	902	903	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	842	846	first strand
Strand 2	C	860	864	anti-parallel
Strand 3	C	872	878	anti-parallel
Strand 4	C	883	887	anti-parallel
Strand 5	C	831	833	anti-parallel
Strand 6	C	823	825	anti-parallel
Strand 7	C	916	917	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	301	302	first strand
Strand 2	D	412	416	anti-parallel
Strand 3	D	325	330	anti-parallel
Strand 4	D	346	351	anti-parallel
Strand 5	D	357	360	anti-parallel
Strand 6	D	365	366	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	386	389	first strand
Strand 2	D	375	381	anti-parallel
Strand 3	D	313	318	anti-parallel
Strand 4	D	426	427	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8G7T

Analysis of interatomic Contacts of Structural Units in PDB entry:
8G7T