Analysis of interatomic Contacts of Structural Units in PDB entry:
8G7W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8G7W entry

There are 2 chains in PDB entry 8G7W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 2478	VAL 3541
B	ALA 2477	ALA 2795

There are 71 helices in PDB entry 8G7W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2504	2508	Right-handed 310
Helix 2	AA2	A	2519	2534	Right-handed alpha
Helix 3	AA3	A	2625	2634	Right-handed alpha
Helix 4	AA4	A	2673	2683	Right-handed alpha
Helix 5	AA5	A	2751	2755	Right-handed 310
Helix 6	AA6	A	2798	2806	Right-handed alpha
Helix 7	AA7	A	2815	2825	Right-handed alpha
Helix 8	AA8	A	2844	2864	Right-handed alpha
Helix 9	AA9	A	2867	2872	Right-handed 310
Helix 10	AB1	A	2892	2909	Right-handed alpha
Helix 11	AB2	A	2921	2927	Right-handed alpha
Helix 12	AB3	A	2927	2932	Right-handed alpha
Helix 13	AB4	A	2979	2983	Right-handed 310
Helix 14	AB5	A	2988	2993	Right-handed alpha
Helix 15	AB6	A	3010	3018	Right-handed alpha
Helix 16	AB7	A	3078	3097	Right-handed alpha
Helix 17	AB8	A	3115	3128	Right-handed alpha
Helix 18	AB9	A	3137	3139	Right-handed 310
Helix 19	AC1	A	3140	3147	Right-handed alpha
Helix 20	AC2	A	3160	3170	Right-handed alpha
Helix 21	AC3	A	3185	3192	Right-handed alpha
Helix 22	AC4	A	3210	3218	Right-handed alpha
Helix 23	AC5	A	3227	3231	Right-handed 310
Helix 24	AC6	A	3232	3248	Right-handed alpha
Helix 25	AC7	A	3264	3274	Right-handed alpha
Helix 26	AC8	A	3304	3316	Right-handed alpha
Helix 27	AC9	A	3327	3331	Right-handed 310
Helix 28	AD1	A	3333	3344	Right-handed alpha
Helix 29	AD2	A	3357	3367	Right-handed alpha
Helix 30	AD3	A	3393	3415	Right-handed alpha
Helix 31	AD4	A	3429	3434	Right-handed alpha
Helix 32	AD5	A	3438	3458	Right-handed alpha
Helix 33	AD6	A	3480	3492	Right-handed alpha
Helix 34	AD7	A	3498	3510	Right-handed alpha
Helix 35	AD8	A	3523	3531	Right-handed alpha
Helix 36	AD9	A	3534	3541	Right-handed 310
Helix 37	AE1	B	2504	2508	Right-handed 310
Helix 38	AE2	B	2519	2534	Right-handed alpha
Helix 39	AE3	B	2625	2634	Right-handed alpha
Helix 40	AE4	B	2673	2683	Right-handed alpha
Helix 41	AE5	B	2684	2687	Right-handed 310
Helix 42	AE6	B	2751	2755	Right-handed 310
Helix 43	AE7	B	2798	2806	Right-handed alpha
Helix 44	AE8	B	2815	2825	Right-handed alpha
Helix 45	AE9	B	2844	2864	Right-handed alpha
Helix 46	AF1	B	2867	2872	Right-handed 310
Helix 47	AF2	B	2892	2909	Right-handed alpha
Helix 48	AF3	B	2921	2932	Right-handed alpha
Helix 49	AF4	B	2988	2993	Right-handed alpha
Helix 50	AF5	B	3010	3018	Right-handed alpha
Helix 51	AF6	B	3078	3097	Right-handed alpha
Helix 52	AF7	B	3115	3128	Right-handed alpha
Helix 53	AF8	B	3137	3139	Right-handed 310
Helix 54	AF9	B	3140	3147	Right-handed alpha
Helix 55	AG1	B	3160	3170	Right-handed alpha
Helix 56	AG2	B	3185	3192	Right-handed alpha
Helix 57	AG3	B	3210	3218	Right-handed alpha
Helix 58	AG4	B	3227	3231	Right-handed 310
Helix 59	AG5	B	3232	3248	Right-handed alpha
Helix 60	AG6	B	3264	3274	Right-handed alpha
Helix 61	AG7	B	3304	3316	Right-handed alpha
Helix 62	AG8	B	3327	3331	Right-handed 310
Helix 63	AG9	B	3333	3344	Right-handed alpha
Helix 64	AH1	B	3357	3366	Right-handed alpha
Helix 65	AH2	B	3393	3415	Right-handed alpha
Helix 66	AH3	B	3429	3434	Right-handed alpha
Helix 67	AH4	B	3438	3457	Right-handed alpha
Helix 68	AH5	B	3480	3492	Right-handed alpha
Helix 69	AH6	B	3498	3510	Right-handed alpha
Helix 70	AH7	B	3523	3531	Right-handed alpha
Helix 71	AH8	B	3534	3541	Right-handed 310

There are 16 sheets in PDB entry 8G7W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2485	2487	first strand
Strand 2	A	2492	2497	anti-parallel
Strand 3	A	2557	2562	anti-parallel
Strand 4	A	2571	2578	anti-parallel
Strand 5	A	2589	2597	anti-parallel
Strand 6	A	2538	2544	anti-parallel
Strand 7	A	2697	2707	anti-parallel
Strand 8	A	2738	2749	anti-parallel
Strand 9	A	2727	2732	anti-parallel
Strand 10	A	2714	2721	anti-parallel
Strand 11	A	2653	2659	anti-parallel
Strand 12	A	2644	2650	anti-parallel
Strand 13	A	2619	2620	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2515	2516	first strand
Strand 2	A	2510	2512	anti-parallel
Strand 3	A	2635	2637	anti-parallel

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There are 15 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2809	2813	first strand
Strand 2	A	2789	2792	parallel
Strand 3	A	2832	2836	parallel
Strand 4	A	2873	2879	parallel
Strand 5	A	2913	2918	parallel
Strand 6	A	2938	2942	parallel
Strand 7	A	2945	2953	anti-parallel
Strand 8	A	2769	2777	anti-parallel
Strand 9	A	3516	3522	anti-parallel
Strand 10	A	3463	3467	parallel
Strand 11	A	3422	3428	parallel
Strand 12	A	3374	3379	parallel
Strand 13	A	3294	3298	parallel
Strand 14	A	3320	3325	parallel
Strand 15	A	3347	3352	parallel

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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2809	2813	first strand
Strand 2	A	2789	2792	parallel
Strand 3	A	2832	2836	parallel
Strand 4	A	2873	2879	parallel
Strand 5	A	2913	2918	parallel
Strand 6	A	2938	2942	parallel
Strand 7	A	2945	2953	anti-parallel
Strand 8	A	2769	2777	anti-parallel
Strand 9	A	3516	3522	anti-parallel
Strand 10	A	3494	3497	anti-parallel
Strand 11	A	3469	3470	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2970	2973	first strand
Strand 2	A	2984	2987	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3062	3066	first strand
Strand 2	A	2999	3009	anti-parallel
Strand 3	A	3030	3038	anti-parallel
Strand 4	A	3050	3054	anti-parallel
Strand 5	A	3070	3072	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3062	3066	first strand
Strand 2	A	2999	3009	anti-parallel
Strand 3	A	3280	3284	anti-parallel
Strand 4	A	3257	3261	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3154	3156	first strand
Strand 2	A	3131	3136	parallel
Strand 3	A	3107	3110	parallel
Strand 4	A	3177	3180	parallel
Strand 5	A	3198	3202	parallel
Strand 6	A	3221	3225	parallel

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There are 13 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2485	2486	first strand
Strand 2	B	2493	2499	anti-parallel
Strand 3	B	2556	2562	anti-parallel
Strand 4	B	2571	2579	anti-parallel
Strand 5	B	2589	2597	anti-parallel
Strand 6	B	2538	2544	anti-parallel
Strand 7	B	2697	2707	anti-parallel
Strand 8	B	2738	2749	anti-parallel
Strand 9	B	2726	2732	anti-parallel
Strand 10	B	2714	2721	anti-parallel
Strand 11	B	2653	2659	anti-parallel
Strand 12	B	2644	2650	anti-parallel
Strand 13	B	2619	2620	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2515	2516	first strand
Strand 2	B	2510	2512	anti-parallel
Strand 3	B	2635	2637	anti-parallel

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There are 15 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2809	2813	first strand
Strand 2	B	2789	2792	parallel
Strand 3	B	2832	2836	parallel
Strand 4	B	2873	2879	parallel
Strand 5	B	2913	2918	parallel
Strand 6	B	2938	2941	parallel
Strand 7	B	2946	2953	anti-parallel
Strand 8	B	2769	2777	anti-parallel
Strand 9	B	3516	3522	anti-parallel
Strand 10	B	3463	3467	parallel
Strand 11	B	3422	3428	parallel
Strand 12	B	3374	3379	parallel
Strand 13	B	3294	3298	parallel
Strand 14	B	3320	3325	parallel
Strand 15	B	3347	3352	parallel

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There are 11 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2809	2813	first strand
Strand 2	B	2789	2792	parallel
Strand 3	B	2832	2836	parallel
Strand 4	B	2873	2879	parallel
Strand 5	B	2913	2918	parallel
Strand 6	B	2938	2941	parallel
Strand 7	B	2946	2953	anti-parallel
Strand 8	B	2769	2777	anti-parallel
Strand 9	B	3516	3522	anti-parallel
Strand 10	B	3494	3497	anti-parallel
Strand 11	B	3469	3470	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2970	2973	first strand
Strand 2	B	2984	2987	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3062	3066	first strand
Strand 2	B	2999	3009	anti-parallel
Strand 3	B	3030	3038	anti-parallel
Strand 4	B	3050	3054	anti-parallel
Strand 5	B	3070	3072	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3062	3066	first strand
Strand 2	B	2999	3009	anti-parallel
Strand 3	B	3280	3284	anti-parallel
Strand 4	B	3257	3261	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3154	3156	first strand
Strand 2	B	3131	3136	parallel
Strand 3	B	3107	3110	parallel
Strand 4	B	3177	3180	parallel
Strand 5	B	3198	3202	parallel
Strand 6	B	3221	3225	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8G7W

Analysis of interatomic Contacts of Structural Units in PDB entry:
8G7W