Analysis of interatomic Contacts of Structural Units in PDB entry:
8G7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G7Y entry

There are 3 chains in PDB entry 8G7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 39ASN 610
B
 ARG 40HIS 609
C
 ALA 83GLY 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 8G7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 126Right-handed alpha
Helix 2
AA2
A
126 134Right-handed alpha
Helix 3
AA3
A
192 196Right-handed 310
Helix 4
AA4
A
198 206Right-handed alpha
Helix 5
AA5
A
216 221Right-handed alpha
Helix 6
AA6
A
232 247Right-handed alpha
Helix 7
AA7
A
248 252Right-handed 310
Helix 8
AA8
A
265 277Right-handed alpha
Helix 9
AA9
A
303 316Right-handed alpha
Helix 10
AB1
A
321 331Right-handed alpha
Helix 11
AB2
A
333 340Right-handed alpha
Helix 12
AB3
A
363 371Right-handed alpha
Helix 13
AB4
A
387 391Right-handed 310
Helix 14
AB5
A
392 397Right-handed 310
Helix 15
AB6
A
402 418Right-handed alpha
Helix 16
AB7
A
424 435Right-handed alpha
Helix 17
AB8
A
437 441Right-handed 310
Helix 18
AB9
A
444 460Right-handed alpha
Helix 19
AC1
A
460 474Right-handed alpha
Helix 20
AC2
A
503 509Right-handed alpha
Helix 21
AC3
A
509 514Right-handed alpha
Helix 22
AC4
A
524 544Right-handed alpha
Helix 23
AC5
A
594 603Right-handed alpha
Helix 24
AC6
A
603 608Right-handed alpha
Helix 25
AC7
B
115 119Right-handed 310
Helix 26
AC8
B
120 126Right-handed alpha
Helix 27
AC9
B
126 134Right-handed alpha
Helix 28
AD1
B
192 196Right-handed 310
Helix 29
AD2
B
199 206Right-handed alpha
Helix 30
AD3
B
217 222Right-handed alpha
Helix 31
AD4
B
232 249Right-handed alpha
Helix 32
AD5
B
250 252Right-handed 310
Helix 33
AD6
B
265 277Right-handed alpha
Helix 34
AD7
B
303 316Right-handed alpha
Helix 35
AD8
B
321 331Right-handed alpha
Helix 36
AD9
B
333 339Right-handed alpha
Helix 37
AE1
B
363 371Right-handed alpha
Helix 38
AE2
B
393 397Right-handed 310
Helix 39
AE3
B
402 418Right-handed alpha
Helix 40
AE4
B
424 435Right-handed alpha
Helix 41
AE5
B
437 441Right-handed 310
Helix 42
AE6
B
444 460Right-handed alpha
Helix 43
AE7
B
460 474Right-handed alpha
Helix 44
AE8
B
502 508Right-handed alpha
Helix 45
AE9
B
509 514Right-handed 310
Helix 46
AF1
B
524 545Right-handed alpha
Helix 47
AF2
B
594 603Right-handed alpha
Helix 48
AF3
B
603 608Right-handed alpha
Helix 49
AF4
C
101 105Right-handed 310
Helix 50
AF5
C
267 274Right-handed alpha
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There are 7 sheets in PDB entry 8G7Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
49 52anti-parallel
Strand 3
A
96 98parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 73first strand
Strand 2
A
143 149anti-parallel
Strand 3
A
208 212anti-parallel
Strand 4
A
177 183parallel
Strand 5
A
254 263parallel
Strand 6
A
286 288parallel
Strand 7
A
377 383parallel
Strand 8
A
478 483parallel
Strand 9
A
580 583parallel
Strand 10
A
588 590anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
49 52anti-parallel
Strand 3
B
96 97parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 56first strand
Strand 2
B
66 68anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
143 145anti-parallel
Strand 3
B
208 212anti-parallel
Strand 4
B
177 183parallel
Strand 5
B
254 263parallel
Strand 6
B
286 290parallel
Strand 7
B
378 383parallel
Strand 8
B
478 483parallel
Strand 9
B
580 583parallel
Strand 10
B
589 590anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
195 197first strand
Strand 2
C
184 189anti-parallel
Strand 3
C
174 181anti-parallel
Strand 4
C
110 118anti-parallel
Strand 5
C
257 263anti-parallel
Strand 6
C
86 88anti-parallel
Strand 7
C
286 287anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 162first strand
Strand 2
C
147 153anti-parallel
Strand 3
C
138 144anti-parallel
Strand 4
C
124 130anti-parallel
Strand 5
C
242 245anti-parallel
Strand 6
C
94 99anti-parallel
Strand 7
C
279 283anti-parallel
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