Analysis of interatomic Contacts of Structural Units in PDB entry:
8G83


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G83 entry

There are 2 chains in PDB entry 8G83 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 132ARG 269
B
 SER 133HIS 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8G83. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
144 146Right-handed 310
Helix 2
AA2
A
149 160Right-handed alpha
Helix 3
AA3
A
176 187Right-handed alpha
Helix 4
AA4
A
196 203Right-handed alpha
Helix 5
AA5
A
211 214Right-handed 310
Helix 6
AA6
A
231 239Right-handed alpha
Helix 7
AA7
A
240 245Right-handed 310
Helix 8
AA8
A
254 267Right-handed alpha
Helix 9
AA9
B
144 146Right-handed 310
Helix 10
AB1
B
149 159Right-handed alpha
Helix 11
AB2
B
166 168Right-handed 310
Helix 12
AB3
B
176 187Right-handed alpha
Helix 13
AB4
B
196 203Right-handed alpha
Helix 14
AB5
B
208 213Right-handed alpha
Helix 15
AB6
B
231 239Right-handed alpha
Helix 16
AB7
B
240 245Right-handed 310
Helix 17
AB8
B
254 267Right-handed alpha
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There are 4 sheets in PDB entry 8G83. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
135 142parallel
Strand 3
A
188 195parallel
Strand 4
A
220 222parallel
Strand 5
A
216 217anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
135 142parallel
Strand 3
A
188 195parallel
Strand 4
A
226 227parallel
Strand 5
A
248 249parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
135 142parallel
Strand 3
B
188 195parallel
Strand 4
B
220 222parallel
Strand 5
B
216 217anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
135 142parallel
Strand 3
B
188 195parallel
Strand 4
B
226 227parallel
Strand 5
B
248 249parallel
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