Analysis of interatomic Contacts of Structural Units in PDB entry:
8G8I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G8I entry

There are 5 chains in PDB entry 8G8I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1VAL 465
B
MET 1VAL 465
C
MET 1VAL 465
D
MET 1VAL 465
E
MET 1VAL 465
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are145 helices in PDB entry 8G8I. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
13 26Right-handed alpha
Helix 3
AA3
A
28 47Right-handed alpha
Helix 4
AA4
A
49 60Right-handed alpha
Helix 5
AA5
A
62 75Right-handed alpha
Helix 6
AA6
A
77 96Right-handed alpha
Helix 7
AA7
A
98 111Right-handed alpha
Helix 8
AA8
A
111 124Right-handed alpha
Helix 9
AA9
A
126 145Right-handed alpha
Helix 10
AB1
A
147 160Right-handed alpha
Helix 11
AB2
A
160 173Right-handed alpha
Helix 12
AB3
A
175 194Right-handed alpha
Helix 13
AB4
A
196 208Right-handed alpha
Helix 14
AB5
A
209 222Right-handed alpha
Helix 15
AB6
A
224 243Right-handed alpha
Helix 16
AB7
A
245 258Right-handed alpha
Helix 17
AB8
A
258 271Right-handed alpha
Helix 18
AB9
A
273 292Right-handed alpha
Helix 19
AC1
A
294 307Right-handed alpha
Helix 20
AC2
A
307 320Right-handed alpha
Helix 21
AC3
A
322 341Right-handed alpha
Helix 22
AC4
A
343 354Right-handed alpha
Helix 23
AC5
A
356 369Right-handed alpha
Helix 24
AC6
A
371 390Right-handed alpha
Helix 25
AC7
A
392 404Right-handed alpha
Helix 26
AC8
A
405 418Right-handed alpha
Helix 27
AC9
A
420 439Right-handed alpha
Helix 28
AD1
A
441 453Right-handed alpha
Helix 29
AD2
A
454 465Right-handed alpha
Helix 30
AD3
B
2 12Right-handed alpha
Helix 31
AD4
B
13 26Right-handed alpha
Helix 32
AD5
B
28 47Right-handed alpha
Helix 33
AD6
B
49 62Right-handed alpha
Helix 34
AD7
B
62 75Right-handed alpha
Helix 35
AD8
B
77 96Right-handed alpha
Helix 36
AD9
B
98 111Right-handed alpha
Helix 37
AE1
B
111 124Right-handed alpha
Helix 38
AE2
B
126 145Right-handed alpha
Helix 39
AE3
B
147 160Right-handed alpha
Helix 40
AE4
B
160 173Right-handed alpha
Helix 41
AE5
B
175 194Right-handed alpha
Helix 42
AE6
B
196 209Right-handed alpha
Helix 43
AE7
B
209 221Right-handed alpha
Helix 44
AE8
B
224 243Right-handed alpha
Helix 45
AE9
B
245 258Right-handed alpha
Helix 46
AF1
B
258 271Right-handed alpha
Helix 47
AF2
B
273 292Right-handed alpha
Helix 48
AF3
B
294 307Right-handed alpha
Helix 49
AF4
B
307 320Right-handed alpha
Helix 50
AF5
B
322 341Right-handed alpha
Helix 51
AF6
B
343 356Right-handed alpha
Helix 52
AF7
B
356 369Right-handed alpha
Helix 53
AF8
B
371 390Right-handed alpha
Helix 54
AF9
B
392 405Right-handed alpha
Helix 55
AG1
B
405 418Right-handed alpha
Helix 56
AG2
B
420 439Right-handed alpha
Helix 57
AG3
B
441 454Right-handed alpha
Helix 58
AG4
B
454 465Right-handed alpha
Helix 59
AG5
C
2 12Right-handed alpha
Helix 60
AG6
C
13 26Right-handed alpha
Helix 61
AG7
C
28 47Right-handed alpha
Helix 62
AG8
C
49 62Right-handed alpha
Helix 63
AG9
C
62 75Right-handed alpha
Helix 64
AH1
C
77 96Right-handed alpha
Helix 65
AH2
C
98 109Right-handed alpha
Helix 66
AH3
C
111 124Right-handed alpha
Helix 67
AH4
C
126 145Right-handed alpha
Helix 68
AH5
C
147 160Right-handed alpha
Helix 69
AH6
C
160 173Right-handed alpha
Helix 70
AH7
C
175 194Right-handed alpha
Helix 71
AH8
C
196 207Right-handed alpha
Helix 72
AH9
C
209 221Right-handed alpha
Helix 73
AI1
C
224 243Right-handed alpha
Helix 74
AI2
C
245 258Right-handed alpha
Helix 75
AI3
C
258 271Right-handed alpha
Helix 76
AI4
C
273 291Right-handed alpha
Helix 77
AI5
C
294 307Right-handed alpha
Helix 78
AI6
C
307 320Right-handed alpha
Helix 79
AI7
C
322 341Right-handed alpha
Helix 80
AI8
C
343 356Right-handed alpha
Helix 81
AI9
C
356 369Right-handed alpha
Helix 82
AJ1
C
371 390Right-handed alpha
Helix 83
AJ2
C
392 405Right-handed alpha
Helix 84
AJ3
C
405 418Right-handed alpha
Helix 85
AJ4
C
420 439Right-handed alpha
Helix 86
AJ5
C
441 453Right-handed alpha
Helix 87
AJ6
C
454 465Right-handed alpha
Helix 88
AJ7
D
2 13Right-handed alpha
Helix 89
AJ8
D
13 26Right-handed alpha
Helix 90
AJ9
D
28 47Right-handed alpha
Helix 91
AK1
D
49 60Right-handed alpha
Helix 92
AK2
D
62 75Right-handed alpha
Helix 93
AK3
D
77 95Right-handed alpha
Helix 94
AK4
D
98 111Right-handed alpha
Helix 95
AK5
D
111 124Right-handed alpha
Helix 96
AK6
D
126 145Right-handed alpha
Helix 97
AK7
D
147 160Right-handed alpha
Helix 98
AK8
D
160 173Right-handed alpha
Helix 99
AK9
D
175 194Right-handed alpha
Helix 100
AL1
D
196 208Right-handed alpha
Helix 101
AL2
D
209 222Right-handed alpha
Helix 102
AL3
D
224 243Right-handed alpha
Helix 103
AL4
D
245 256Right-handed alpha
Helix 104
AL5
D
258 271Right-handed alpha
Helix 105
AL6
D
273 292Right-handed alpha
Helix 106
AL7
D
294 306Right-handed alpha
Helix 107
AL8
D
307 320Right-handed alpha
Helix 108
AL9
D
322 340Right-handed alpha
Helix 109
AM1
D
343 354Right-handed alpha
Helix 110
AM2
D
356 369Right-handed alpha
Helix 111
AM3
D
371 390Right-handed alpha
Helix 112
AM4
D
392 404Right-handed alpha
Helix 113
AM5
D
405 418Right-handed alpha
Helix 114
AM6
D
420 439Right-handed alpha
Helix 115
AM7
D
441 454Right-handed alpha
Helix 116
AM8
D
454 465Right-handed alpha
Helix 117
AM9
E
2 13Right-handed alpha
Helix 118
AN1
E
13 26Right-handed alpha
Helix 119
AN2
E
28 47Right-handed alpha
Helix 120
AN3
E
49 62Right-handed alpha
Helix 121
AN4
E
62 75Right-handed alpha
Helix 122
AN5
E
77 94Right-handed alpha
Helix 123
AN6
E
98 109Right-handed alpha
Helix 124
AN7
E
111 124Right-handed alpha
Helix 125
AN8
E
126 145Right-handed alpha
Helix 126
AN9
E
147 160Right-handed alpha
Helix 127
AO1
E
160 173Right-handed alpha
Helix 128
AO2
E
175 194Right-handed alpha
Helix 129
AO3
E
196 209Right-handed alpha
Helix 130
AO4
E
209 222Right-handed alpha
Helix 131
AO5
E
224 243Right-handed alpha
Helix 132
AO6
E
245 258Right-handed alpha
Helix 133
AO7
E
258 271Right-handed alpha
Helix 134
AO8
E
273 292Right-handed alpha
Helix 135
AO9
E
294 305Right-handed alpha
Helix 136
AP1
E
307 320Right-handed alpha
Helix 137
AP2
E
322 341Right-handed alpha
Helix 138
AP3
E
343 356Right-handed alpha
Helix 139
AP4
E
356 369Right-handed alpha
Helix 140
AP5
E
371 389Right-handed alpha
Helix 141
AP6
E
392 404Right-handed alpha
Helix 142
AP7
E
405 419Right-handed alpha
Helix 143
AP8
E
420 438Right-handed alpha
Helix 144
AP9
E
441 453Right-handed alpha
Helix 145
AQ1
E
454 465Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8G8I

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il