Analysis of interatomic Contacts of Structural Units in PDB entry:
8G8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8G8W entry

There are 3 chains in PDB entry 8G8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 10LYS 298
B
 GLN 4THR 466
C
 VAL 5THR 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 8G8W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 31Right-handed alpha
Helix 2
AA2
A
31 43Right-handed alpha
Helix 3
AA3
A
57 70Right-handed alpha
Helix 4
AA4
A
77 88Right-handed alpha
Helix 5
AA5
A
88 105Right-handed alpha
Helix 6
AA6
A
112 130Right-handed alpha
Helix 7
AA7
A
131 144Right-handed alpha
Helix 8
AA8
A
157 168Right-handed alpha
Helix 9
AA9
A
176 205Right-handed alpha
Helix 10
AB1
A
211 242Right-handed alpha
Helix 11
AB2
A
250 262Right-handed alpha
Helix 12
AB3
A
263 268Right-handed 310
Helix 13
AB4
A
270 298Right-handed alpha
Helix 14
AB5
B
31 35Right-handed 310
Helix 15
AB6
B
65 68Right-handed 310
Helix 16
AB7
B
90 94Right-handed 310
Helix 17
AB8
B
137 153Right-handed alpha
Helix 18
AB9
B
163 172Right-handed alpha
Helix 19
AC1
B
185 195Right-handed alpha
Helix 20
AC2
B
203 208Right-handed alpha
Helix 21
AC3
B
211 217Right-handed alpha
Helix 22
AC4
B
274 277Right-handed 310
Helix 23
AC5
B
278 283Right-handed alpha
Helix 24
AC6
B
330 340Right-handed alpha
Helix 25
AC7
B
349 351Right-handed 310
Helix 26
AC8
B
352 359Right-handed alpha
Helix 27
AC9
B
393 404Right-handed alpha
Helix 28
AD1
B
407 418Right-handed alpha
Helix 29
AD2
B
425 433Right-handed alpha
Helix 30
AD3
B
435 447Right-handed alpha
Helix 31
AD4
B
456 466Right-handed alpha
Helix 32
AD5
C
31 35Right-handed 310
Helix 33
AD6
C
89 93Right-handed 310
Helix 34
AD7
C
109 114Right-handed 310
Helix 35
AD8
C
141 156Right-handed alpha
Helix 36
AD9
C
167 172Right-handed alpha
Helix 37
AE1
C
397 408Right-handed alpha
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There are 9 sheets in PDB entry 8G8W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 10first strand
Strand 2
B
20 28anti-parallel
Strand 3
B
81 87anti-parallel
Strand 4
B
71 76anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
121 124parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
36 42anti-parallel
Strand 5
B
48 54anti-parallel
Strand 6
B
61 63anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 159first strand
Strand 2
B
128 131parallel
Strand 3
B
180 183parallel
Strand 4
B
380 387anti-parallel
Strand 5
B
227 233anti-parallel
Strand 6
B
422 423anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 220first strand
Strand 2
B
223 224anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 348first strand
Strand 2
B
235 238anti-parallel
Strand 3
B
364 366anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 10first strand
Strand 2
C
22 26anti-parallel
Strand 3
C
80 84anti-parallel
Strand 4
C
71 75anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 14first strand
Strand 2
C
125 128parallel
Strand 3
C
94 101anti-parallel
Strand 4
C
36 42anti-parallel
Strand 5
C
48 54anti-parallel
Strand 6
C
60 62anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 14first strand
Strand 2
C
125 128parallel
Strand 3
C
94 101anti-parallel
Strand 4
C
120 121anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 163first strand
Strand 2
C
134 135parallel
Strand 3
C
184 188parallel
Strand 4
C
387 391anti-parallel
Strand 5
C
230 234anti-parallel
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