Analysis of interatomic Contacts of Structural Units in PDB entry:
8G9T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8G9T entry

There are 15 chains in PDB entry 8G9T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 116	PHE 185
B	THR 2	GLY 284
C	THR 2	GLY 284
D	THR 2	GLY 284
E	THR 2	GLY 284
F	THR 2	GLY 284
G	GLY 2	ALA 125
H	THR 2	GLY 284
I	GLY 2	ALA 125
J	GLY 2	ALA 125
K	MET 1	ALA 582
M	THR 2	GLY 284
N	ARG 2	PRO 206
O	G 4	A 46
L	GLY 2	ALA 125

There are114 helices in PDB entry 8G9T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	135	147	Right-handed alpha
Helix 2	AA2	A	161	163	Right-handed 310
Helix 3	AA3	A	164	169	Right-handed alpha
Helix 4	AA4	B	42	58	Right-handed alpha
Helix 5	AA5	B	72	82	Right-handed alpha
Helix 6	AA6	B	83	88	Right-handed alpha
Helix 7	AA7	B	91	106	Right-handed alpha
Helix 8	AA8	B	106	112	Right-handed alpha
Helix 9	AA9	B	185	193	Right-handed alpha
Helix 10	AB1	B	195	209	Right-handed alpha
Helix 11	AB2	B	210	213	Right-handed 310
Helix 12	AB3	B	239	247	Right-handed alpha
Helix 13	AB4	B	260	262	Right-handed 310
Helix 14	AB5	B	272	276	Right-handed 310
Helix 15	AB6	C	42	58	Right-handed alpha
Helix 16	AB7	C	72	81	Right-handed alpha
Helix 17	AB8	C	92	106	Right-handed alpha
Helix 18	AB9	C	106	113	Right-handed alpha
Helix 19	AC1	C	185	193	Right-handed alpha
Helix 20	AC2	C	195	209	Right-handed alpha
Helix 21	AC3	C	239	246	Right-handed alpha
Helix 22	AC4	D	42	58	Right-handed alpha
Helix 23	AC5	D	74	83	Right-handed alpha
Helix 24	AC6	D	83	88	Right-handed alpha
Helix 25	AC7	D	90	106	Right-handed alpha
Helix 26	AC8	D	106	112	Right-handed alpha
Helix 27	AC9	D	185	190	Right-handed alpha
Helix 28	AD1	D	195	213	Right-handed alpha
Helix 29	AD2	D	239	246	Right-handed alpha
Helix 30	AD3	E	42	58	Right-handed alpha
Helix 31	AD4	E	72	82	Right-handed alpha
Helix 32	AD5	E	90	106	Right-handed alpha
Helix 33	AD6	E	106	112	Right-handed alpha
Helix 34	AD7	E	185	193	Right-handed alpha
Helix 35	AD8	E	195	210	Right-handed alpha
Helix 36	AD9	E	211	213	Right-handed 310
Helix 37	AE1	E	239	247	Right-handed alpha
Helix 38	AE2	E	260	262	Right-handed 310
Helix 39	AE3	E	272	276	Right-handed 310
Helix 40	AE4	F	42	58	Right-handed alpha
Helix 41	AE5	F	72	82	Right-handed alpha
Helix 42	AE6	F	93	106	Right-handed alpha
Helix 43	AE7	F	106	112	Right-handed alpha
Helix 44	AE8	F	185	190	Right-handed alpha
Helix 45	AE9	F	195	209	Right-handed alpha
Helix 46	AF1	F	239	247	Right-handed alpha
Helix 47	AF2	F	260	262	Right-handed 310
Helix 48	AF3	F	272	276	Right-handed 310
Helix 49	AF4	G	9	29	Right-handed alpha
Helix 50	AF5	G	35	47	Right-handed alpha
Helix 51	AF6	G	47	66	Right-handed alpha
Helix 52	AF7	G	68	86	Right-handed alpha
Helix 53	AF8	G	94	114	Right-handed alpha
Helix 54	AF9	G	116	124	Right-handed alpha
Helix 55	AG1	H	42	58	Right-handed alpha
Helix 56	AG2	H	72	82	Right-handed alpha
Helix 57	AG3	H	91	106	Right-handed alpha
Helix 58	AG4	H	106	112	Right-handed alpha
Helix 59	AG5	H	185	193	Right-handed alpha
Helix 60	AG6	H	195	209	Right-handed alpha
Helix 61	AG7	H	210	214	Right-handed 310
Helix 62	AG8	H	239	246	Right-handed alpha
Helix 63	AG9	H	260	262	Right-handed 310
Helix 64	AH1	H	272	276	Right-handed 310
Helix 65	AH2	I	9	29	Right-handed alpha
Helix 66	AH3	I	35	47	Right-handed alpha
Helix 67	AH4	I	47	66	Right-handed alpha
Helix 68	AH5	I	68	86	Right-handed alpha
Helix 69	AH6	I	94	114	Right-handed alpha
Helix 70	AH7	I	116	124	Right-handed alpha
Helix 71	AH8	J	9	29	Right-handed alpha
Helix 72	AH9	J	35	47	Right-handed alpha
Helix 73	AI1	J	47	66	Right-handed alpha
Helix 74	AI2	J	68	86	Right-handed alpha
Helix 75	AI3	J	94	114	Right-handed alpha
Helix 76	AI4	J	116	124	Right-handed alpha
Helix 77	AI5	K	2	16	Right-handed alpha
Helix 78	AI6	K	73	77	Right-handed 310
Helix 79	AI7	K	84	89	Right-handed alpha
Helix 80	AI8	K	97	118	Right-handed alpha
Helix 81	AI9	K	121	133	Right-handed alpha
Helix 82	AJ1	K	134	144	Right-handed alpha
Helix 83	AJ2	K	172	190	Right-handed alpha
Helix 84	AJ3	K	243	260	Right-handed alpha
Helix 85	AJ4	K	282	290	Right-handed alpha
Helix 86	AJ5	K	299	302	Right-handed 310
Helix 87	AJ6	K	303	311	Right-handed alpha
Helix 88	AJ7	K	347	361	Right-handed alpha
Helix 89	AJ8	K	376	384	Right-handed alpha
Helix 90	AJ9	K	397	408	Right-handed alpha
Helix 91	AK1	K	412	427	Right-handed alpha
Helix 92	AK2	K	430	447	Right-handed alpha
Helix 93	AK3	K	468	486	Right-handed alpha
Helix 94	AK4	K	493	504	Right-handed alpha
Helix 95	AK5	K	504	522	Right-handed alpha
Helix 96	AK6	K	525	543	Right-handed alpha
Helix 97	AK7	K	551	571	Right-handed alpha
Helix 98	AK8	K	573	582	Right-handed alpha
Helix 99	AK9	M	42	58	Right-handed alpha
Helix 100	AL1	M	96	106	Right-handed alpha
Helix 101	AL2	M	106	113	Right-handed alpha
Helix 102	AL3	M	185	192	Right-handed alpha
Helix 103	AL4	M	195	213	Right-handed alpha
Helix 104	AL5	M	239	246	Right-handed alpha
Helix 105	AL6	M	260	262	Right-handed 310
Helix 106	AL7	M	271	276	Right-handed 310
Helix 107	AL8	N	30	42	Right-handed alpha
Helix 108	AL9	N	117	131	Right-handed alpha
Helix 109	AM1	L	9	29	Right-handed alpha
Helix 110	AM2	L	35	47	Right-handed alpha
Helix 111	AM3	L	47	66	Right-handed alpha
Helix 112	AM4	L	68	86	Right-handed alpha
Helix 113	AM5	L	94	114	Right-handed alpha
Helix 114	AM6	L	116	124	Right-handed alpha

There are 41 sheets in PDB entry 8G9T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	159	first strand
Strand 2	A	118	123	anti-parallel
Strand 3	A	130	134	anti-parallel
Strand 4	A	174	175	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	41	first strand
Strand 2	B	134	136	anti-parallel
Strand 3	B	176	184	anti-parallel
Strand 4	B	129	131	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	41	first strand
Strand 2	B	134	136	anti-parallel
Strand 3	B	176	184	anti-parallel
Strand 4	B	6	17	anti-parallel
Strand 5	B	220	231	anti-parallel
Strand 6	B	278	281	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	115	first strand
Strand 2	B	124	125	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	149	first strand
Strand 2	B	166	169	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	251	first strand
Strand 2	B	264	267	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	32	first strand
Strand 2	C	39	41	anti-parallel
Strand 3	C	134	136	anti-parallel
Strand 4	C	176	184	anti-parallel
Strand 5	C	129	131	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	32	first strand
Strand 2	C	39	41	anti-parallel
Strand 3	C	134	136	anti-parallel
Strand 4	C	176	184	anti-parallel
Strand 5	C	7	15	anti-parallel
Strand 6	C	222	230	anti-parallel
Strand 7	C	278	281	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	147	first strand
Strand 2	C	168	170	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	247	251	first strand
Strand 2	C	264	268	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	33	first strand
Strand 2	D	38	41	anti-parallel
Strand 3	D	134	136	anti-parallel
Strand 4	D	176	184	anti-parallel
Strand 5	D	129	131	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	33	first strand
Strand 2	D	38	41	anti-parallel
Strand 3	D	134	136	anti-parallel
Strand 4	D	176	184	anti-parallel
Strand 5	D	6	15	anti-parallel
Strand 6	D	222	231	anti-parallel
Strand 7	D	278	281	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	147	first strand
Strand 2	D	168	170	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	251	first strand
Strand 2	D	264	268	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	131	first strand
Strand 2	E	181	184	anti-parallel
Strand 3	E	7	10	anti-parallel
Strand 4	E	227	230	anti-parallel
Strand 5	E	280	281	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	41	first strand
Strand 2	E	134	136	anti-parallel
Strand 3	E	176	179	anti-parallel
Strand 4	E	13	15	anti-parallel
Strand 5	E	221	222	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	22	23	first strand
Strand 2	E	29	30	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	114	115	first strand
Strand 2	E	124	125	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	147	first strand
Strand 2	E	168	170	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	248	251	first strand
Strand 2	E	264	267	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	41	first strand
Strand 2	F	134	136	anti-parallel
Strand 3	F	176	184	anti-parallel
Strand 4	F	129	131	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	41	first strand
Strand 2	F	134	136	anti-parallel
Strand 3	F	176	184	anti-parallel
Strand 4	F	8	15	anti-parallel
Strand 5	F	223	230	anti-parallel
Strand 6	F	278	281	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	17	18	first strand
Strand 2	F	219	220	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	114	115	first strand
Strand 2	F	124	125	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	248	251	first strand
Strand 2	F	264	267	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	32	33	first strand
Strand 2	H	38	41	anti-parallel
Strand 3	H	134	136	anti-parallel
Strand 4	H	176	184	anti-parallel
Strand 5	H	129	131	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	32	33	first strand
Strand 2	H	38	41	anti-parallel
Strand 3	H	134	136	anti-parallel
Strand 4	H	176	184	anti-parallel
Strand 5	H	7	15	anti-parallel
Strand 6	H	225	230	anti-parallel
Strand 7	H	278	281	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	114	115	first strand
Strand 2	H	124	125	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	247	251	first strand
Strand 2	H	264	268	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	25	26	first strand
Strand 2	K	63	64	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	29	30	first strand
Strand 2	K	59	60	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	44	47	first strand
Strand 2	K	32	36	anti-parallel
Strand 3	K	158	161	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	324	325	first strand
Strand 2	K	345	346	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	330	333	first strand
Strand 2	K	336	339	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	40	41	first strand
Strand 2	M	134	136	anti-parallel
Strand 3	M	176	184	anti-parallel
Strand 4	M	7	15	anti-parallel
Strand 5	M	221	230	anti-parallel
Strand 6	M	278	281	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	114	115	first strand
Strand 2	M	124	125	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	143	147	first strand
Strand 2	M	168	172	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	247	251	first strand
Strand 2	M	264	268	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	23	24	first strand
Strand 2	N	87	108	parallel
Strand 3	N	3	12	anti-parallel
Strand 4	N	151	152	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	62	70	first strand
Strand 2	N	87	108	anti-parallel
Strand 3	N	47	56	anti-parallel
Strand 4	N	200	201	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	170	171	first strand
Strand 2	N	192	193	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8G9T

Analysis of interatomic Contacts of Structural Units in PDB entry:
8G9T