Analysis of interatomic Contacts of Structural Units in PDB entry:
8GA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GA0 entry

There are 2 chains in PDB entry 8GA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 22LEU 461
B
 GLN 20LEU 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8GA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 28Right-handed alpha
Helix 2
AA2
A
33 38Right-handed alpha
Helix 3
AA3
A
38 48Right-handed alpha
Helix 4
AA4
A
50 55Right-handed alpha
Helix 5
AA5
A
55 67Right-handed alpha
Helix 6
AA6
A
68 71Right-handed 310
Helix 7
AA7
A
76 78Right-handed 310
Helix 8
AA8
A
79 89Right-handed alpha
Helix 9
AA9
A
90 93Right-handed 310
Helix 10
AB1
A
96 101Right-handed alpha
Helix 11
AB2
A
109 114Right-handed alpha
Helix 12
AB3
A
127 132Right-handed alpha
Helix 13
AB4
A
133 141Right-handed alpha
Helix 14
AB5
A
148 165Right-handed alpha
Helix 15
AB6
A
180 188Right-handed alpha
Helix 16
AB7
A
196 202Right-handed alpha
Helix 17
AB8
A
211 216Right-handed alpha
Helix 18
AB9
A
217 231Right-handed alpha
Helix 19
AC1
A
248 252Right-handed 310
Helix 20
AC2
A
253 274Right-handed alpha
Helix 21
AC3
A
275 280Right-handed alpha
Helix 22
AC4
A
281 284Right-handed 310
Helix 23
AC5
A
287 292Right-handed alpha
Helix 24
AC6
A
292 309Right-handed alpha
Helix 25
AC7
A
337 343Right-handed alpha
Helix 26
AC8
A
360 379Right-handed alpha
Helix 27
AC9
A
380 383Right-handed 310
Helix 28
AD1
A
387 393Right-handed alpha
Helix 29
AD2
A
397 402Right-handed alpha
Helix 30
AD3
A
406 416Right-handed alpha
Helix 31
AD4
A
419 422Right-handed 310
Helix 32
AD5
A
423 440Right-handed alpha
Helix 33
AD6
A
443 461Right-handed alpha
Helix 34
AD7
B
21 26Right-handed alpha
Helix 35
AD8
B
31 52Right-handed alpha
Helix 36
AD9
B
53 69Right-handed alpha
Helix 37
AE1
B
74 82Right-handed alpha
Helix 38
AE2
B
86 98Right-handed alpha
Helix 39
AE3
B
123 132Right-handed alpha
Helix 40
AE4
B
133 141Right-handed alpha
Helix 41
AE5
B
148 160Right-handed alpha
Helix 42
AE6
B
161 164Right-handed 310
Helix 43
AE7
B
177 187Right-handed alpha
Helix 44
AE8
B
196 201Right-handed alpha
Helix 45
AE9
B
215 231Right-handed alpha
Helix 46
AF1
B
253 277Right-handed alpha
Helix 47
AF2
B
291 297Right-handed alpha
Helix 48
AF3
B
300 309Right-handed alpha
Helix 49
AF4
B
310 313Right-handed 310
Helix 50
AF5
B
319 324Right-handed alpha
Helix 51
AF6
B
329 334Right-handed alpha
Helix 52
AF7
B
334 345Right-handed alpha
Helix 53
AF8
B
356 379Right-handed alpha
Helix 54
AF9
B
380 383Right-handed 310
Helix 55
AG1
B
393 397Right-handed 310
Helix 56
AG2
B
404 410Right-handed alpha
Helix 57
AG3
B
412 417Right-handed alpha
Helix 58
AG4
B
422 439Right-handed alpha
Helix 59
AG5
B
443 448Right-handed alpha
Helix 60
AG6
B
448 457Right-handed alpha
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There are no sheets in PDB entry 8GA0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il