Analysis of interatomic Contacts of Structural Units in PDB entry:
8GA3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GA3 entry

There are 2 chains in PDB entry 8GA3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 19LEU 461
B
 ARG 19LEU 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 50 helices in PDB entry 8GA3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 28Right-handed alpha
Helix 2
AA2
A
30 49Right-handed alpha
Helix 3
AA3
A
50 58Right-handed alpha
Helix 4
AA4
A
60 64Right-handed 310
Helix 5
AA5
A
75 89Right-handed alpha
Helix 6
AA6
A
95 101Right-handed alpha
Helix 7
AA7
A
102 105Right-handed 310
Helix 8
AA8
A
109 114Right-handed alpha
Helix 9
AA9
A
123 139Right-handed alpha
Helix 10
AB1
A
148 166Right-handed alpha
Helix 11
AB2
A
171 190Right-handed alpha
Helix 12
AB3
A
192 202Right-handed alpha
Helix 13
AB4
A
213 231Right-handed alpha
Helix 14
AB5
A
253 280Right-handed alpha
Helix 15
AB6
A
280 285Right-handed alpha
Helix 16
AB7
A
288 296Right-handed alpha
Helix 17
AB8
A
300 309Right-handed alpha
Helix 18
AB9
A
319 326Right-handed alpha
Helix 19
AC1
A
334 348Right-handed alpha
Helix 20
AC2
A
349 351Right-handed 310
Helix 21
AC3
A
358 363Right-handed alpha
Helix 22
AC4
A
363 379Right-handed alpha
Helix 23
AC5
A
387 401Right-handed alpha
Helix 24
AC6
A
410 417Right-handed alpha
Helix 25
AC7
A
422 439Right-handed alpha
Helix 26
AC8
A
443 457Right-handed alpha
Helix 27
AC9
B
31 67Right-handed alpha
Helix 28
AD1
B
74 99Right-handed alpha
Helix 29
AD2
B
109 117Right-handed alpha
Helix 30
AD3
B
123 132Right-handed alpha
Helix 31
AD4
B
134 139Right-handed alpha
Helix 32
AD5
B
140 142Right-handed 310
Helix 33
AD6
B
148 166Right-handed alpha
Helix 34
AD7
B
172 188Right-handed alpha
Helix 35
AD8
B
192 202Right-handed alpha
Helix 36
AD9
B
213 231Right-handed alpha
Helix 37
AE1
B
253 280Right-handed alpha
Helix 38
AE2
B
290 309Right-handed alpha
Helix 39
AE3
B
319 324Right-handed alpha
Helix 40
AE4
B
329 346Right-handed alpha
Helix 41
AE5
B
347 351Right-handed 310
Helix 42
AE6
B
357 362Right-handed alpha
Helix 43
AE7
B
363 373Right-handed alpha
Helix 44
AE8
B
379 383Right-handed 310
Helix 45
AE9
B
387 395Right-handed alpha
Helix 46
AF1
B
396 401Right-handed alpha
Helix 47
AF2
B
411 417Right-handed alpha
Helix 48
AF3
B
418 422Right-handed 310
Helix 49
AF4
B
423 440Right-handed alpha
Helix 50
AF5
B
444 461Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8GA3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il