Analysis of interatomic Contacts of Structural Units in PDB entry:
8GA5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GA5 entry

There are 2 chains in PDB entry 8GA5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 12LEU 461
B
 GLN 12LEU 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 8GA5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 26Right-handed alpha
Helix 2
AA2
A
32 71Right-handed alpha
Helix 3
AA3
A
74 100Right-handed alpha
Helix 4
AA4
A
101 105Right-handed 310
Helix 5
AA5
A
108 116Right-handed alpha
Helix 6
AA6
A
126 141Right-handed alpha
Helix 7
AA7
A
147 166Right-handed alpha
Helix 8
AA8
A
170 190Right-handed alpha
Helix 9
AA9
A
192 202Right-handed alpha
Helix 10
AB1
A
211 233Right-handed alpha
Helix 11
AB2
A
248 250Right-handed 310
Helix 12
AB3
A
251 285Right-handed alpha
Helix 13
AB4
A
287 305Right-handed alpha
Helix 14
AB5
A
309 313Right-handed 310
Helix 15
AB6
A
319 325Right-handed alpha
Helix 16
AB7
A
329 349Right-handed alpha
Helix 17
AB8
A
356 379Right-handed alpha
Helix 18
AB9
A
386 401Right-handed alpha
Helix 19
AC1
A
404 417Right-handed alpha
Helix 20
AC2
A
418 420Right-handed 310
Helix 21
AC3
A
421 439Right-handed alpha
Helix 22
AC4
A
443 457Right-handed alpha
Helix 23
AC5
B
14 24Right-handed alpha
Helix 24
AC6
B
33 71Right-handed alpha
Helix 25
AC7
B
74 101Right-handed alpha
Helix 26
AC8
B
102 105Right-handed 310
Helix 27
AC9
B
108 117Right-handed alpha
Helix 28
AD1
B
123 140Right-handed alpha
Helix 29
AD2
B
147 166Right-handed alpha
Helix 30
AD3
B
170 189Right-handed alpha
Helix 31
AD4
B
192 202Right-handed alpha
Helix 32
AD5
B
211 233Right-handed alpha
Helix 33
AD6
B
248 250Right-handed 310
Helix 34
AD7
B
251 285Right-handed alpha
Helix 35
AD8
B
287 305Right-handed alpha
Helix 36
AD9
B
309 313Right-handed 310
Helix 37
AE1
B
318 325Right-handed alpha
Helix 38
AE2
B
330 349Right-handed alpha
Helix 39
AE3
B
356 379Right-handed alpha
Helix 40
AE4
B
380 383Right-handed 310
Helix 41
AE5
B
387 395Right-handed alpha
Helix 42
AE6
B
395 401Right-handed alpha
Helix 43
AE7
B
404 417Right-handed alpha
Helix 44
AE8
B
421 439Right-handed alpha
Helix 45
AE9
B
443 460Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8GA5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il