Analysis of interatomic Contacts of Structural Units in PDB entry:
8GA9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8GA9 entry

There are 4 chains in PDB entry 8GA9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 165
C
 MET 167VAL 331
E
 MET 333VAL 497
G
 MET 499VAL 663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 8GA9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 10Right-handed alpha
Helix 2
AA2
A
12 24Right-handed alpha
Helix 3
AA3
A
26 40Right-handed alpha
Helix 4
AA4
A
42 53Right-handed alpha
Helix 5
AA5
A
55 69Right-handed alpha
Helix 6
AA6
A
69 83Right-handed alpha
Helix 7
AA7
A
85 95Right-handed alpha
Helix 8
AA8
A
98 111Right-handed alpha
Helix 9
AA9
A
112 126Right-handed alpha
Helix 10
AB1
A
129 139Right-handed alpha
Helix 11
AB2
A
141 153Right-handed alpha
Helix 12
AB3
A
155 164Right-handed alpha
Helix 13
AB4
C
168 176Right-handed alpha
Helix 14
AB5
C
178 190Right-handed alpha
Helix 15
AB6
C
192 206Right-handed alpha
Helix 16
AB7
C
208 219Right-handed alpha
Helix 17
AB8
C
221 235Right-handed alpha
Helix 18
AB9
C
235 248Right-handed alpha
Helix 19
AC1
C
251 261Right-handed alpha
Helix 20
AC2
C
264 277Right-handed alpha
Helix 21
AC3
C
278 292Right-handed alpha
Helix 22
AC4
C
295 305Right-handed alpha
Helix 23
AC5
C
307 319Right-handed alpha
Helix 24
AC6
C
321 330Right-handed alpha
Helix 25
AC7
E
334 342Right-handed alpha
Helix 26
AC8
E
344 356Right-handed alpha
Helix 27
AC9
E
358 372Right-handed alpha
Helix 28
AD1
E
374 385Right-handed alpha
Helix 29
AD2
E
387 401Right-handed alpha
Helix 30
AD3
E
401 415Right-handed alpha
Helix 31
AD4
E
417 427Right-handed alpha
Helix 32
AD5
E
430 443Right-handed alpha
Helix 33
AD6
E
444 458Right-handed alpha
Helix 34
AD7
E
460 472Right-handed alpha
Helix 35
AD8
E
473 485Right-handed alpha
Helix 36
AD9
E
487 497Right-handed alpha
Helix 37
AE1
G
500 509Right-handed alpha
Helix 38
AE2
G
510 523Right-handed alpha
Helix 39
AE3
G
524 538Right-handed alpha
Helix 40
AE4
G
540 551Right-handed alpha
Helix 41
AE5
G
553 566Right-handed alpha
Helix 42
AE6
G
570 581Right-handed alpha
Helix 43
AE7
G
583 593Right-handed alpha
Helix 44
AE8
G
596 609Right-handed alpha
Helix 45
AE9
G
610 624Right-handed alpha
Helix 46
AF1
G
627 637Right-handed alpha
Helix 47
AF2
G
639 651Right-handed alpha
Helix 48
AF3
G
653 662Right-handed alpha
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There are no sheets in PDB entry 8GA9
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